Gene Rpic_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3620 
Symbol 
ID6287547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3789850 
End bp3790455 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content67% 
IMG OID642627204 
ProductTrans-aconitate 2-methyltransferase 
Protein accessionYP_001901171 
Protein GI187930684 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATC ACGCCGCTCG CCTTGAGCGC GCCATCGAGC AGGCTGCGGT TGCCGCTGAC 
CTCGCCGGCA AAGATGAGCG GGTGGGGCTG CAAGGCTTGT CACCGGATGC GGCGCCGCTT
GGCCAGCGGA TGATCGTCGC GGCAGACGAG GACATACGGA TCGTTCGTCA GCGGCCGAAG
CTGATCGGCA AGCTGGCGGC GGGTGGCCAC CTGGCTGTGC AGATGCCGGA CAACCTTGAC
GAACCGGCGC ACCGCCTGAT GCGCGAAGTG GCCGCTGTGG GGCCGTGGGC CGGCAAGCTC
AAGGGGGTGG AACGGACGGA GCGCTTCGAT GCGCGCCGCT ATTACGCGCT GCTCTCGCCG
CTGTGCTCGC GCGTCGACGT GTGGCGCACC ACGTACATGC ATCCGCTGCA AGGCGGCGCC
GATGCGGTGG TCGAATGGTT CAAGGGCAGC GCGCTGCGGC CATTCCTCGC AGCGCTGAGC
GAGGACGAGC GCCCCGTATT CCTCACGCGC TATCGCGACA TGATTGCCCA GGCCTATCCG
GCACTCGACG ATGGCACGGT GCTGCTGCCG TTTCCGCGCC TGTTCATCGT GGCGACACGC
AAGTAG
 
Protein sequence
MQHHAARLER AIEQAAVAAD LAGKDERVGL QGLSPDAAPL GQRMIVAADE DIRIVRQRPK 
LIGKLAAGGH LAVQMPDNLD EPAHRLMREV AAVGPWAGKL KGVERTERFD ARRYYALLSP
LCSRVDVWRT TYMHPLQGGA DAVVEWFKGS ALRPFLAALS EDERPVFLTR YRDMIAQAYP
ALDDGTVLLP FPRLFIVATR K