Gene Rpic_3602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3602 
Symbol 
ID6286414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3773704 
End bp3774753 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID642627186 
Productconserved hypothetical signal peptide protein 
Protein accessionYP_001901153 
Protein GI187930666 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTTT TTACCTGCAC GACCGCCCGC GCACACGGCG TCCGGGGCTG GATCACGCCG 
TGGCTCGCTG CCCTTCTGGC AGTGGCAACT TCGCATGCTC TCGCACAAGA CCCGACGCGC
CTGACGCTCA TGGTCAGCGG CACCGCCAAG ATGATCTACC TGCCGGCCAC GCTGGCGCAA
CGTCTGGGCT ATTTCCGCGA CGAAGGGCTC GAAGTGGAAC TGCTCTCGCA GCCCGCCGGC
GTTGATGCGG AGAGCGAACT GCTCACCGGC TTTGCGCAAG GCGTGGTCGG CTTCTATGAC
CACACCATCG ACCTCCAGGC CAAGGGCAAG GAAGTGCGCG CCATTGTCGT ATTCAGCCAG
GTGCCGGGCG AAGCGGAAGT CGTGTCGACA CGCTTGCCGG CGACGGTGCA GTCGATGCGT
GACTTGCGCG GCCGCACGCT GGGCGTGACG GGGCTGGGTG CATCCACGAG CTTTCTCACG
CGCTACCTGA TGGTGCAGCA GGGGCTCTCG GCCGGCGACT ACACCATGCT GCCGGTTGGC
GCGGAACACA GTTTCGTCAC TGCGCTGCGC AACGGCCGCA TCGATGCAGG CATGACCACC
GACCCGACGG TCTCGCGCCT CGTGCACAGC GGCGAGGCCC GCGTGCTGCT CGACTTGCGC
ACGCTCGAGA GCACACGAGC GGCGCTCGGC GGTTCGTACC CGGCCGCGTG CCTGTACCTG
CAGACCGCAT GGCTGGAAGC ACATCCGGAC ATCGCTACCA AACTGGCCCA CGCATTCGTG
CGCACCCTGC ATTACATGCA CACGCACGGT GCAGAAGACA TTGCCGCCCG CATGCCGCCT
GAATTCCGGC GCGATCATCC CGAGCTGTAC ACAAAAGCGC TTGCCGCCGC GTTGCCCACC
TTCAGCACCG ACGGACGCAT GCCGGACGAC GGCCCACCCA CCGTCCTGCG CGTCCTCGCC
GCCAGCAATG CCAACGCGCG CGACAAGCAC ATCGACCTCT CGCGCACCTA CACCAACAGG
TTTGTCGATC AGGTGCGCGA GCGCCGCTAG
 
Protein sequence
MGVFTCTTAR AHGVRGWITP WLAALLAVAT SHALAQDPTR LTLMVSGTAK MIYLPATLAQ 
RLGYFRDEGL EVELLSQPAG VDAESELLTG FAQGVVGFYD HTIDLQAKGK EVRAIVVFSQ
VPGEAEVVST RLPATVQSMR DLRGRTLGVT GLGASTSFLT RYLMVQQGLS AGDYTMLPVG
AEHSFVTALR NGRIDAGMTT DPTVSRLVHS GEARVLLDLR TLESTRAALG GSYPAACLYL
QTAWLEAHPD IATKLAHAFV RTLHYMHTHG AEDIAARMPP EFRRDHPELY TKALAAALPT
FSTDGRMPDD GPPTVLRVLA ASNANARDKH IDLSRTYTNR FVDQVRERR