Gene Rpic_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3596 
Symbol 
ID6289575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3767850 
End bp3768590 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID642627180 
Productmajor intrinsic protein 
Protein accessionYP_001901147 
Protein GI187930660 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTC CACCGTCCCT GGCTCGCCGC ATCGTCGCGG AAGGGCTTGG TACGGCCTTG 
CTGATTGCGG TAGTGATCGG CACGGGCATC CACGCAAGCC GGCTCTCCGG CGGCGATGCC
ACCTGGACGC TGCTGGCGCA ATCGCTGGCC GGCGGCGCCG GTTTGCTGGC GCTGCTGACG
GTGTTCGCGC CAGTGTCGGG GGCGCACCTG AACCCGGCGG TCACGCTGTC CGCGTTGCTG
CGGGGCGGTC TGCGTGGGCA TGAGGCGCTG GCCTATCAGG CTGCACAGGC CGTGGGCGCC
GCGCTGGGTG TGGCAGCCGC GCATGGCATG TTCGGCATGC CGGCGTGGGC AGCGGGCACT
CACGCCGCCA CAGGGCCGGC GCTGTGGTGG AGCGAAGCGC TGGCAACGTT CGGACTGATC
GGGGTGGGCA TCGCATGCGG CCGTCATGCG CCAAAGCAAT TGCCGCTGGT GGTGGCCGCC
TATATCGCGG CCGGGTACTG GTTCACGTCG TCGTCATCGC TGGCCAACCC CGCGTTGGCT
CTTGCCTGCG CGCTGACCGA CGGCCCCTCC GGCATCCGCC CCAGCGATGT CCCGGGCTAC
ATGCTGGCGC AACTGGTGGG CACGTTGCTG GCAACGCCGT TGTTCAATTG GCTGATGGGT
GTGGACGCAG CACCCGCGCT GGCATCCGGC ACCACCATCG CACCAGCGCA AGCCGTGCCG
ATGCATCGCC AGGCAAGTTG A
 
Protein sequence
MSAPPSLARR IVAEGLGTAL LIAVVIGTGI HASRLSGGDA TWTLLAQSLA GGAGLLALLT 
VFAPVSGAHL NPAVTLSALL RGGLRGHEAL AYQAAQAVGA ALGVAAAHGM FGMPAWAAGT
HAATGPALWW SEALATFGLI GVGIACGRHA PKQLPLVVAA YIAAGYWFTS SSSLANPALA
LACALTDGPS GIRPSDVPGY MLAQLVGTLL ATPLFNWLMG VDAAPALASG TTIAPAQAVP
MHRQAS