| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3571 |
|---|
| Symbol | algL |
|---|
| ID | 6286710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3740220 |
|---|
| End bp | 3741182 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642627155 |
|---|
| Product | poly(beta-D-mannuronate) lyase |
|---|
| Protein accession | YP_001901122 |
|---|
| Protein GI | 187930635 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.555836 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCG CTTACCTTCG AACGTTGTTC GCTCTTTCGC TGGCCGTCGG CGCAGGCTTC
GGCTTGGTGC ATGCGGCCCG CGCCTGTGAG ATTCCCGCAC CCGTCCAGAC GATCGATCCC
CCCGGCTTTT ACGACGACGC AGCCGGCTAC GCGCGCGACG TAAAACCGAT GCGCAATTTC
ATCGCGCAAC TCAACGCGTC AGCCGACAAG GGCGATTGGA CGTGCGTGCT GAGCCAGCTT
CGAACCTGGG CCGATGCCGA TGCGCTGATG GGCAAGATTT CCGGCTATCA GGGCCACTAC
GAACGATCGT GGGCCGGAAC GGATTTCGCC ATGGTGCTGC TGCGTATGCC AAGCGACATC
CGCAAGCGAA ACCAAGCGCA GCTCGACGCG ATTGCACCGT GGCTCGAACG CATTGCGATC
GCCACCCGCA ACGCCGAGGC GATCAATCAT CTGCATAACA ATCTGGTGTA TTGGGCCGGC
CTCAACCTGA TTGCCATCGG CACCGCAACC GACAACAGCG ACCTGATCAA CTCCGGACTC
CTGCGCATTC GCGAGGGCAT CCGCGATATC GGCCCGGACG GCGCGCTCGC ACGCGAGGTC
AAGCGCGGGG ACCGTGCGCT GCACTACCAC ACGTTCGCGC TCATTCCGCT GGTGTTTGCC
GCCGAGCTGG TGCAGCGGCG CCATATCGAC CTGTACCGGG AGAACGGCCA CGCCATCGGC
CGCCTGGCGA ACCTTGTGAT CAATGCGGTG GTTGACCCGG CGAGCTTCGA AAAAATCACG
CCGATCAAGC AGGCGCTGTT TCCATGGACC CTCCAGGATG AGTTGTGCTG GATGGAGCCC
TACTACGCCC ACGTGCGAGA CCCGAGGCTG CCTGCGTTGA TTGCGCCGCG CCGCCCATTC
TCTGAATGGA GGCTCGGCGG CAACGTTACG GCGGCGTGGG GCGCCGAGCT GCCCGGCCAT
TGA
|
|---|
| Protein sequence | MRRAYLRTLF ALSLAVGAGF GLVHAARACE IPAPVQTIDP PGFYDDAAGY ARDVKPMRNF
IAQLNASADK GDWTCVLSQL RTWADADALM GKISGYQGHY ERSWAGTDFA MVLLRMPSDI
RKRNQAQLDA IAPWLERIAI ATRNAEAINH LHNNLVYWAG LNLIAIGTAT DNSDLINSGL
LRIREGIRDI GPDGALAREV KRGDRALHYH TFALIPLVFA AELVQRRHID LYRENGHAIG
RLANLVINAV VDPASFEKIT PIKQALFPWT LQDELCWMEP YYAHVRDPRL PALIAPRRPF
SEWRLGGNVT AAWGAELPGH
|
|---|
| |