| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3559 |
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| Symbol | |
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| ID | 6286258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3726101 |
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| End bp | 3726904 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642627143 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001901110 |
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| Protein GI | 187930623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTC TTCGTTCCGC ATGGGCGGGT GCACCGGCCA TGGAATCTCC GCGACAATCG
GTGCCGATGC TCACCGTGGC CGCCGCGCTG GCGATCATCG TGGCGGCAGG CGGTTGGCTG
TCGCATGCGC GCCAGGCACC CGCCGTCGAT GCCACGCAGC TGGAATCGTG GCGCGCAATG
GTCGTGCAAG CGATGGAGCC CGAGGCGCTG CAGCAATTGC GTCAGCGCGC ACGCAGCGGC
TCCGTGCCGG CGCAGTCAGC GTTGGGCGAA GCCTTGCTCA GCGCGCACGA CGGCGCCTTG
CGGAACGAAG GGATGCGCTG GCTTGAAACC GCTGCATCGA GCGACCCACG TGCGCAGTTA
TCGCTGGGCA AGGCGCTGCT GCTCGGTACC GGCGGTGTGG AACGCGACTA CCCGCGCGCG
CTGCGCCTGC TGCGTCAATC CGCTGACAAG GGCGACGCGG CCGCGGCGTA CTACCTGGGC
GTGATGTATC GCAGCGGCTA CGGCACGGCT GTCGACACAA CACAGGCTGC ACACTGGTTT
GATCGTGCTG CCCGCCACGA GATTCCGGCA GCGATGTTCA TGCTGGCGAA TGCCTACCGC
GACGGTGATG GTGTGCCACG CGATGAAGCC CGCGCGCTGG CGTTGTACCA GGACGCCGCC
GAGCACGAAT TGCCGGAGGC CGTGCAAGCT CTGGCGATGG CGTATCAGAA CGGCGAACTG
GGTCTCAAGC GCGACGATGC CGCGTATCAC CAGCAGTGGA TTGAAACGGC ACATGCGCTG
AAGCATCCTG CGCTCGCGCC GTGA
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| Protein sequence | MPSLRSAWAG APAMESPRQS VPMLTVAAAL AIIVAAGGWL SHARQAPAVD ATQLESWRAM
VVQAMEPEAL QQLRQRARSG SVPAQSALGE ALLSAHDGAL RNEGMRWLET AASSDPRAQL
SLGKALLLGT GGVERDYPRA LRLLRQSADK GDAAAAYYLG VMYRSGYGTA VDTTQAAHWF
DRAARHEIPA AMFMLANAYR DGDGVPRDEA RALALYQDAA EHELPEAVQA LAMAYQNGEL
GLKRDDAAYH QQWIETAHAL KHPALAP
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