Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3520 |
Symbol | |
ID | 6286793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3690868 |
End bp | 3691779 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642627105 |
Product | parB-like partition protein |
Protein accession | YP_001901072 |
Protein GI | 187930585 |
COG category | [K] Transcription |
COG ID | [COG1475] Predicted transcriptional regulators |
TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0000243626 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGCACGA TGAAAAAAAA GGGACTGGGC CGCGGCCTCG AAGCGCTGCT CGGCAGTCCA GCCGAGATTG TCGAAGCCGC CAAGCAGGAG GGCGCCCCGA CGGTCCTGAA GCTGGAACAG ATGCAGCCCG GCAAATATCA GCCGCGCACG CGCATGGACG AAGGCGCGCT GCAGGAGCTC GCCGCCAGCA TCCGCGCACA AGGCCTGATG CAGCCGATTC TGGTGCGCAA GGTCGAGTCA GACGGCGCGA AGCCGAAGTA CGAAATCATC GCGGGTGAAC GCCGCTTCCG CGCTTCGCGC CTCGCCGGCC TGACCGAAGT GCCCGTCCTC GTGAAGGACG TGCCGGATGA ATCAGCCGCT GCCATGGCGC TGATCGAGAA CATCCAGCGC GAAGATCTCA ACCCGCTGGA AGAGGCGCAG GGCATTGCGC GCCTGGTGCG TGAATTCCAG TTCACGCACG AGCAGGCGGC GGAATCGGTA GGGCGTTCGC GCAGCGCGGT GTCGAACCTG TTGCGCCTGC TCAATCTCGC TCAGCCCGTG CAGACCATGC TGATGGCCGG CGACCTCGAC ATGGGCCACG CCCGCGCGCT GCTCGCCGTC GATGGCGCTA CGCAGATCAC ATTGGCCAAC CAGATCGTCA ACAAGCGCCT GTCGGTGCGC GAGACGGAAA AACTGGTCGC GTTGACGCTC AAGCCATTCG AGCTGAAGTC ACTCAAGCAA AAGGGCGGTC ACCAAGGTGG TCGTGACGTC GCGCGCCTGG AAGAGGAGTT GGCCGATCAA CTGGGCCTGG GTGTGCAGAT CAAGCTGGCG GCCAAGGGCC GTGGTCAGTT GACCGTGCAG TTCAGCAGTC TTGACGAGTT CGACGGCTTG CTCGCGCGCC TGCGACCGGA CGGCAACGAA GAGGCGGCCT GA
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Protein sequence | MSTMKKKGLG RGLEALLGSP AEIVEAAKQE GAPTVLKLEQ MQPGKYQPRT RMDEGALQEL AASIRAQGLM QPILVRKVES DGAKPKYEII AGERRFRASR LAGLTEVPVL VKDVPDESAA AMALIENIQR EDLNPLEEAQ GIARLVREFQ FTHEQAAESV GRSRSAVSNL LRLLNLAQPV QTMLMAGDLD MGHARALLAV DGATQITLAN QIVNKRLSVR ETEKLVALTL KPFELKSLKQ KGGHQGGRDV ARLEEELADQ LGLGVQIKLA AKGRGQLTVQ FSSLDEFDGL LARLRPDGNE EAA
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