Gene Rpic_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3520 
Symbol 
ID6286793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3690868 
End bp3691779 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content64% 
IMG OID642627105 
ProductparB-like partition protein 
Protein accessionYP_001901072 
Protein GI187930585 
COG category[K] Transcription 
COG ID[COG1475] Predicted transcriptional regulators 
TIGRFAM ID[TIGR00180] ParB-like partition proteins 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0000243626 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGCACGA TGAAAAAAAA GGGACTGGGC CGCGGCCTCG AAGCGCTGCT CGGCAGTCCA 
GCCGAGATTG TCGAAGCCGC CAAGCAGGAG GGCGCCCCGA CGGTCCTGAA GCTGGAACAG
ATGCAGCCCG GCAAATATCA GCCGCGCACG CGCATGGACG AAGGCGCGCT GCAGGAGCTC
GCCGCCAGCA TCCGCGCACA AGGCCTGATG CAGCCGATTC TGGTGCGCAA GGTCGAGTCA
GACGGCGCGA AGCCGAAGTA CGAAATCATC GCGGGTGAAC GCCGCTTCCG CGCTTCGCGC
CTCGCCGGCC TGACCGAAGT GCCCGTCCTC GTGAAGGACG TGCCGGATGA ATCAGCCGCT
GCCATGGCGC TGATCGAGAA CATCCAGCGC GAAGATCTCA ACCCGCTGGA AGAGGCGCAG
GGCATTGCGC GCCTGGTGCG TGAATTCCAG TTCACGCACG AGCAGGCGGC GGAATCGGTA
GGGCGTTCGC GCAGCGCGGT GTCGAACCTG TTGCGCCTGC TCAATCTCGC TCAGCCCGTG
CAGACCATGC TGATGGCCGG CGACCTCGAC ATGGGCCACG CCCGCGCGCT GCTCGCCGTC
GATGGCGCTA CGCAGATCAC ATTGGCCAAC CAGATCGTCA ACAAGCGCCT GTCGGTGCGC
GAGACGGAAA AACTGGTCGC GTTGACGCTC AAGCCATTCG AGCTGAAGTC ACTCAAGCAA
AAGGGCGGTC ACCAAGGTGG TCGTGACGTC GCGCGCCTGG AAGAGGAGTT GGCCGATCAA
CTGGGCCTGG GTGTGCAGAT CAAGCTGGCG GCCAAGGGCC GTGGTCAGTT GACCGTGCAG
TTCAGCAGTC TTGACGAGTT CGACGGCTTG CTCGCGCGCC TGCGACCGGA CGGCAACGAA
GAGGCGGCCT GA
 
Protein sequence
MSTMKKKGLG RGLEALLGSP AEIVEAAKQE GAPTVLKLEQ MQPGKYQPRT RMDEGALQEL 
AASIRAQGLM QPILVRKVES DGAKPKYEII AGERRFRASR LAGLTEVPVL VKDVPDESAA
AMALIENIQR EDLNPLEEAQ GIARLVREFQ FTHEQAAESV GRSRSAVSNL LRLLNLAQPV
QTMLMAGDLD MGHARALLAV DGATQITLAN QIVNKRLSVR ETEKLVALTL KPFELKSLKQ
KGGHQGGRDV ARLEEELADQ LGLGVQIKLA AKGRGQLTVQ FSSLDEFDGL LARLRPDGNE
EAA