Gene Rpic_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3508 
Symbol 
ID6288242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3678144 
End bp3678608 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content67% 
IMG OID642627093 
ProductCoA-binding domain protein 
Protein accessionYP_001901060 
Protein GI187930573 
COG category[R] General function prediction only 
COG ID[COG1832] Predicted CoA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0120178 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTCCG CCAATCCCTC CTACGCTGAC GAGCAAGCCA CCATGCGCCG GCTGCTGTCC 
GGCAAGACCA TCGCCGTGGT CGGGCTGTCG CCGCGTCCCA CGCGGCCCAG CTATGACGTG
GCGCGCTATC TGCAGCAGGC CGGCTATCGC ATCGTGCCCG TCAATCCGCA GCACGCGGGC
GAAGACGTGC TCGGCGAGCC CTGCTACGCC ACGCTCACCG AAGCTGCGAC GACGCTTGCC
GCCGCCGGCC AGCGCATCGA TCTGGTCGAT ATCTTCCGGC GCTCAGAGCA GGTGCTGCCC
GTCGTGCAGG AAGCCGTGAT GCTGGGCGTG GGCGGCATCT GGGTGCAGCT CGGCATCGTG
AATGACGAGG CGATGGCCGT GGCGCGCAAC GCTGGCATTC CGGCCGTGCA AGACCGCTGC
ACGAAGATCG AACACTGGCG ACTCGGCATC GGCGAGCAAA AATAA
 
Protein sequence
MLSANPSYAD EQATMRRLLS GKTIAVVGLS PRPTRPSYDV ARYLQQAGYR IVPVNPQHAG 
EDVLGEPCYA TLTEAATTLA AAGQRIDLVD IFRRSEQVLP VVQEAVMLGV GGIWVQLGIV
NDEAMAVARN AGIPAVQDRC TKIEHWRLGI GEQK