Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3490 |
Symbol | |
ID | 6286755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3653326 |
End bp | 3654702 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642627075 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001901042 |
Protein GI | 187930555 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTTT CTGTTTTCGA CCTCTTCAAG ATCGGCATCG GTCCGTCCAG CTCGCACACC GTCGGGCCGA TGCGCGCCGC GCTGATGTTC GCCTCCGGCC TCGAAGCCGA TGGGCTGATG CCGCAAGTCG CCAGTGTCCG CGTCGAGCTG TACGGTTCGC TCGGCGCCAC CGGCAAGGGC CACGGCACGG ACCGCGGCGT CATCCTTGGC CTGATGGGCG AGGCGCCGGA CACCATCGAC CCCGACTCCA TCGATGCCAA GCTGGCGGAG CTGCGCGCCT CGCAATCGCT GTCGCTGCTG GGCCGCCATG CGGTGCGCTT TACCGAGAAG GAGCACATCG CCTTCTATCG CCGCGAGGCG ATGGCAGAGC ACCCGAACGG CATGAAGTTC CACGCCTTCG ATGCAGCAGG CGAGCGGCTG CGCGAGGCGC GCTACCTGTC GGTGGGCGGT GGCTTTGTCG TCACGGCCGG CGCACCGAAC ACGCAGGTGC TTGCCGCGCA TGACCAGTTG CCGCACCCGT TCCGCAGCGG CAAGGAACTG CTGGCGATGT GCGAATCGAC GGGCAAATCC ATCGCCCGGC TGATGCTCGA AAACGAACTG ACGTGGCGCA GCGAAGCCGA AGTGCGCGCC GGCCTGCTCA ACATCTGGCA CGTGATGCAG GCGTGCGTCG CGCGCGGCTG CCGCACGGAA GGCGAACTGC CGGGCCCGTT CCACGTGCGT CGCCGCGCAG CCGAGTTGTA TTCAACGCTC ACGGTGCAGG CCGAACGTAC GCTGTCCGAT CCGCTGTCGG TCATCGATTG GGTGAACCTG TATGCGATTG CAGTTAACGA AGAGAACGCC GCGGGCGGGC GCGTCGTCAC GGCACCGACC AACGGCGCAG CCGGGATCAT CCCGGCCGTG ATGCATTACT ACGACCGCTT CGTTCCCGGC GCGAACGACA ACGGCATCGT GGATTTTCTG CTCACCGCTG GCGCGATCGG CATGCTTTAC AAGATGAACG CGTCGATCTC GGGCGCGGAA GTCGGCTGCC AGGGCGAAGT CGGCGTGGCG TGTTCGATGG CTGCCGGAGC GCTGGCAGCG GTACTGGGCG GCACGCCTGC GCAGGTCGAG AACGCAGCGG AGATCGGCAT GGAGCACAAC CTGGGGCTGA CATGCGACCC GGTTGGCGGG CTGGTGCAGA TTCCGTGCAT CGAGCGCAAT GCGATGGCGT CTGTGAAGGC GGTGAATGCG GCGCGCATGG CGTTGCGGGG GGATGGCACG CATTATGTTT CGCTCGACTC CGTGATCAAG ACGATGCGGG AGACGGGGGC GGATATGAAG ACGAAGTACA AGGAGACGGC GCGGGGTGGG TTGGCGGTGA ATATTGTGGA GTGTTGA
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Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF ASGLEADGLM PQVASVRVEL YGSLGATGKG HGTDRGVILG LMGEAPDTID PDSIDAKLAE LRASQSLSLL GRHAVRFTEK EHIAFYRREA MAEHPNGMKF HAFDAAGERL REARYLSVGG GFVVTAGAPN TQVLAAHDQL PHPFRSGKEL LAMCESTGKS IARLMLENEL TWRSEAEVRA GLLNIWHVMQ ACVARGCRTE GELPGPFHVR RRAAELYSTL TVQAERTLSD PLSVIDWVNL YAIAVNEENA AGGRVVTAPT NGAAGIIPAV MHYYDRFVPG ANDNGIVDFL LTAGAIGMLY KMNASISGAE VGCQGEVGVA CSMAAGALAA VLGGTPAQVE NAAEIGMEHN LGLTCDPVGG LVQIPCIERN AMASVKAVNA ARMALRGDGT HYVSLDSVIK TMRETGADMK TKYKETARGG LAVNIVEC
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