| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3483 |
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| Symbol | |
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| ID | 6289365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3641981 |
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| End bp | 3643465 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642627068 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001901035 |
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| Protein GI | 187930548 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.331416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCCGT TCGCCAAGCC GGCCGACAAT CCGTCCGCCG CAAATGACAC CGCCTTCCGC
TGGTCGGCGC CGCAGGTGCG CGCGCTCGCG CAGCGCTTTG ATACGCACGG CCCGCGCTAC
ACCTCGTACC CAACGGCCGA CCGCTTTCAC AACAAATTCG GCAACGCCGA TTACCTCGAC
GCCTTGCACC GCCGCGCCGC GATCGCGCCC GCGCTGCATG CGCCGCTGTC GCTGTACATG
CACCTGCCGT TCTGCGCGAA CCTTTGCTAC TACTGCGGCT GCAACAAGGT CATCACAAAG
GATCACTCCC GCAGCGCACG GTACGTTGAA ACGCTCGCCC GCGAGATGGC GATGGTCGCC
AACCAGATCG GCCCACTGCG CCGCGTGACG CAGTTGCATT GGGGCGGCGG CACGCCGACT
TTTCTTGCGC ACGACGAAAT GCGTGCCGTG ATGGCCGCCA CGCGCGAGCA TTTCGACGTG
GCCAACGATG GGGAGATCTC CGTCGAACTC GACCCGCGCC ATGCCGACGA CGCCACGCTC
GAAGTATTGG CCGAGATCGG TTTCAACCGC GCAAGCCTGG GCATCCAAGA CTTTGACCCC
GACGTCCAGC GCGCGGTCCA CCGCATCCAA AGCGTGGAAG AGACACGTCG CGTGGTCGAC
ACCGCGCGCC GGCTGGGCTT CGAGTCGATC AGCTTCGACC TGATCTACGG CTTGCCATAT
CAGCGCACGG AAACCTTCAA CGCCACGCTG GATCGCGTGC TGGAGATGGC GCCCGATCGG
CTGTCCGTCT ACAGCTATGC GCATCTGCCG CACCTGTTCA AGGCGCAGCG CCGCATCGAC
ATGCTCACGC TGCCTACCGC CGACGAAAAG CTCGACTTGC TCGCCATGAC GGTCGAGCGG
CTCGTCGCCG AAGGCTATGT CTACATCGGC ATGGATCACT TTGCGCGGCC TGACGATGCA
CTCGCCGTCG CACAGCGTGA AGGGCGGCTG CAGCGCAATT TCCAGGGCTA TTCCACGCAC
GCCGATTGCG ACATGCTGGC GTTTGGCGTG TCCGCCATCA GCCGCGTGGG CGATGTGTAT
GCGCAGAACG AAAAGGATCT CGACGCGTAC TACGCTCGCA TCGACGCAGG CGAGCTGGCC
GTGCTGCGCG GCATGTCGCT CACGCCGGAC GATCACGTGC GCCGCGCGCT GATCGGCGAG
CTGATGTGCG GATTTGAATT GAACATGCGC GCATTCGGCG CGCGCCACGG GCTGGACTTC
AAGCGCAGTT TTGCGGACGA GTTGCAGGCG CTGGCGCCGC TGGAAGAAGC CGGGCTGGTG
AAGGTCGGGG ACGAGCGCAT CGTCATCACA CCGCAAGGGC GGCTGCTCGT GCGCCGCATC
GCGATGGTGT TCGATGCGCA CCTGCGCGAG GCGGGCACGG AGCGCGCGAT GGAAGCCGAG
GGCAAGCCCG TCACCTTTGT CCCGCGCTAC TCCAAGGTGG TCTGA
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| Protein sequence | MFPFAKPADN PSAANDTAFR WSAPQVRALA QRFDTHGPRY TSYPTADRFH NKFGNADYLD
ALHRRAAIAP ALHAPLSLYM HLPFCANLCY YCGCNKVITK DHSRSARYVE TLAREMAMVA
NQIGPLRRVT QLHWGGGTPT FLAHDEMRAV MAATREHFDV ANDGEISVEL DPRHADDATL
EVLAEIGFNR ASLGIQDFDP DVQRAVHRIQ SVEETRRVVD TARRLGFESI SFDLIYGLPY
QRTETFNATL DRVLEMAPDR LSVYSYAHLP HLFKAQRRID MLTLPTADEK LDLLAMTVER
LVAEGYVYIG MDHFARPDDA LAVAQREGRL QRNFQGYSTH ADCDMLAFGV SAISRVGDVY
AQNEKDLDAY YARIDAGELA VLRGMSLTPD DHVRRALIGE LMCGFELNMR AFGARHGLDF
KRSFADELQA LAPLEEAGLV KVGDERIVIT PQGRLLVRRI AMVFDAHLRE AGTERAMEAE
GKPVTFVPRY SKVV
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