Gene Rpic_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3477 
Symbol 
ID6286259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3633044 
End bp3633955 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID642627062 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001901029 
Protein GI187930542 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.193343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAAGC TCAAGCAGAT CGAAGCGTTC ATCGCCGTGG TGGAGCACGG CAGCATGGCC 
GCCGCCGCGC TCACGCAGGA TGTGACGCCC GTCATGATCG GCCGCCGCAT CAACGCGCTG
GAAGCCCGCC TTGGCGTGAA GCTGCTGCAT CGGTCCACCC GCCGCATTGC GGTGACGGAG
CAGGGCGCGG TCTTCATGGA ACAGTGCAAG AAGGCGCTGG GCGAGCTGGA CCGCGCGGAG
CTGCTCGTTG CCGAAGGCCG CCACAAGGCG ACCGGGCACC TGATCGTCTC GGCGCCCGCA
GCCTTCGGCC GCAAGCACGT CGCGCCGCAT GCGCCGGACT TTCTGCGTGC CAACCCCGAC
GTGCGCATCT CGTTCAACCT GACCGACCGC GTGGTCGACC TCGTGCGCGA AGGCTACGAC
GTGGGCATCC GCATTGGCGG CGCGATCGAT CCGAACTTCG TGGCGATTCG CCTGGCGTCG
AACAAGCGCG TCGTGTGCGG CACGCCCGCG TACTTCGCCA AGCATGGCGT GCCGCGCACG
CTCGATGATC TCGCGCGCCA CAACTGCCTA GCCTTTAACC TGCAGGGCGG GCAGCAGCGC
GGCTGGTATT TCCAGCAGAA CGGCAAGGCC GTCACCGTGA AGGTGAACGG CAACCTCGAC
TGTAACGATG GTGAGTTGCT GCACCGCTGG ATGGGTGAAG GCCTCGGTCT GGGCTGGCGC
TCAACGTGGG AGATTCAGCC GGAGCTGGAA TCCGGCGCGC TGATGACGGT GCTGGACGAC
TACGCGCTGC CCGACTACGA CATCCTCGCC GTGTACCCGC AGCAGCGGCC GGTGCCGGCA
AAGATCCGGT TCTTTATCGA ACACCTGAAG TCGGTGTACG GGCAGGCAGG GTATTGGTCG
CGAACGGGTT GA
 
Protein sequence
MDKLKQIEAF IAVVEHGSMA AAALTQDVTP VMIGRRINAL EARLGVKLLH RSTRRIAVTE 
QGAVFMEQCK KALGELDRAE LLVAEGRHKA TGHLIVSAPA AFGRKHVAPH APDFLRANPD
VRISFNLTDR VVDLVREGYD VGIRIGGAID PNFVAIRLAS NKRVVCGTPA YFAKHGVPRT
LDDLARHNCL AFNLQGGQQR GWYFQQNGKA VTVKVNGNLD CNDGELLHRW MGEGLGLGWR
STWEIQPELE SGALMTVLDD YALPDYDILA VYPQQRPVPA KIRFFIEHLK SVYGQAGYWS
RTG