Gene Rpic_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3474 
Symbol 
ID6287461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3631171 
End bp3631911 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content65% 
IMG OID642627059 
Producttranscriptional regulator, GntR family 
Protein accessionYP_001901026 
Protein GI187930539 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAG CGGCGCTGTT GTCGGACGGC GGTAAAATCG GCGCCATGAC TGAAACCACC 
GCCGCCGACA TCTCCTCCGA AGGCATTGCC GATGACATCG CCCAGGCGAT CGTCGCGCAT
CGGCTGCCGC CGGGCACCAA GCTGCGCGAA GAGGCGCTGG CGCGGGTCTA CCACGTCAGC
CGCACGAAGA TTCGCGCAGC GCTGCTAATG CTGGCCAAGG ACAAGCTCAT CCGCATGGAG
CCCGATCGGG GCGCCTTCGT GGCCAAACCC GACGAGACCG AGGCGCGCGA GGTCTTTGCG
GTGCGCCGCG TGCTGGAGGT TGCGCTGGTG CGCGAGTTCA TCGCCAAAGC GACGCCCGCC
GATTACAAGC GGCTGGAAAA GCACCTGGCC GAAGAGCACA AGGTGGCGGC CAGCGGCGAC
CTGTCGGACG TCCCGCGCCG CAATCGCCTG ATGGCCGACT TTCACCTCCT GATGGCCGAC
GTGGTCGGGA ACAGCGTGCT CAAGGAAATG CTGTACGAGC TTTCCGCCCG CAGCTCGGTG
ATCACGATGA TGTATCAGTC GACGTACGAC GCCGTGCGTT CATCGGAGGA GCACACAGCT
CTCCTGGACG CCGCTAAGCG CGGTGACGTG GAAGGCGCTA TCGCTCTGAT GGAAGAGCAC
ATGGCGCACA CCGAGGCGTC ACTCAAGTTC GAATCGCCGG GCGGCCGTGC GACAGATCTC
GTAGCCGCCC TCCTCGCCTG A
 
Protein sequence
MPEAALLSDG GKIGAMTETT AADISSEGIA DDIAQAIVAH RLPPGTKLRE EALARVYHVS 
RTKIRAALLM LAKDKLIRME PDRGAFVAKP DETEAREVFA VRRVLEVALV REFIAKATPA
DYKRLEKHLA EEHKVAASGD LSDVPRRNRL MADFHLLMAD VVGNSVLKEM LYELSARSSV
ITMMYQSTYD AVRSSEEHTA LLDAAKRGDV EGAIALMEEH MAHTEASLKF ESPGGRATDL
VAALLA