Gene Rpic_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3466 
Symbol 
ID6286555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3623956 
End bp3624612 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content65% 
IMG OID642627051 
Productbeta-lactamase domain protein 
Protein accessionYP_001901018 
Protein GI187930531 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG TTGTCGTCCC CGTTACGCCG TTTGAACAGA ACTGCACGCT GCTGATTGGT 
GACGATGGCA CTGCCGCCGT CACCGACCCG GGCGGCGATA TCGAGCGCAT CCTGGCTGCC
GCCAAGCAAC ACGGCGCGCG CATCGAAAAA ATCCTGCTCA CGCATGGCCA CGTCGACCAC
TGCGCCGCCG CCGACGCCCT GCGCACGCAG CTCGGCGTGC CGATCGAAGG GCCGCAGAAG
GATGAAGCGT TCTGGATCGA TCAGCTGCCA GCGCAGAGCC AGCGCTTTGG CTTTCCGCCC
GCCAAGGCGT TCGTGCCCGA CCGCTGGCTG GAAGACGGCG ACACCGTGGA AGCCGCAGGC
CGCACACTGC AGGTGTTCCA CTGTCCTGGC CACACACCCG GCCACGTGGT GTTCTTCAGC
GCGCAAGACC GCGTTGCCAT CGTCGGCGAC GTGCTGTTCG CGGGGTCGAT CGGCCGCACC
GATTTTCCGC GTGGCAACCA TGCGGACCTG ATCAACGCGA TCCGTACCAA GCTGTGGCCA
CTCGGCGACG ACGTCACCTT TGTGCCGGGC CATGGGCCGG TCTCGACCTT TGGCGAGGAG
CGCGCCAGCA ACCCGTACGT TGCTGACCGC CTGTTTGCCA ACGAGGGCTC AGCATGA
 
Protein sequence
MKVVVVPVTP FEQNCTLLIG DDGTAAVTDP GGDIERILAA AKQHGARIEK ILLTHGHVDH 
CAAADALRTQ LGVPIEGPQK DEAFWIDQLP AQSQRFGFPP AKAFVPDRWL EDGDTVEAAG
RTLQVFHCPG HTPGHVVFFS AQDRVAIVGD VLFAGSIGRT DFPRGNHADL INAIRTKLWP
LGDDVTFVPG HGPVSTFGEE RASNPYVADR LFANEGSA