Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3425 |
Symbol | |
ID | 6286787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3591455 |
End bp | 3592825 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642627010 |
Product | amino acid permease-associated region |
Protein accession | YP_001900978 |
Protein GI | 187930491 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCAAT CCGCCAAGCT CAATGCCGAT TCCCTGGGTA TCGTTGAATC GGTGATCATG GGCATCGCCG GTACTGCCCC GGCCTACAGC ATCGAGATCA CGACTTCCAC CATCATCGGG ACGGCCGGCA CGCAGTCGCC GGCCAGTATC CTGGTGTGCG GGCTCATCAT GTTTGGCATC GCGTACGCGT TCATCAACAT GAACCGTGCC CTGGCGAGTG CCGGCACCTC GTATTCGTGG GTGAGCATGG TATTCGGGCG CGCACTCGGC TTCTTTGCCG GCTGGGCGCT GCTGGTGCTG TGCTGCGTGT TCATGGTGTC TGCCATGATT CCGGCGGCAA ATGCCACGCT GCTCATCTTT GATCGGCCCA TGATGAACAA CGTGCACTAC GTGACGTTGA TCGCGGCGGC ATGGCTCACG TTTGTCAGCG TGGTGGTCGT CAAGGGCATC AAGCTCACCA GCTACGTGCA GGTGCTGATG ACGATTGTCG AGGGTGTCAT TCTGCTGGGG ATCATCGTCG CGAGTTTCAT GGTGTTTCCG CGTACGCCGC AGCACCCGTT CTCGTGGGTC TGGTTCTGGC CTTTCGCGTT CACACCCAAG CTGTTCGCCA ACGGCGCGTT GGTGGCGATC TTCTTCTTTT ACGGCTGGGA CGTGACGATG AACCTCAGCG AAGAGACGCG CGACGCGAAC CGCACGCCCG GCCGCGCCGC GTTCTGGTCG ATGGTGTTCT TGATGGTGTT CTTCCTTGTC TTCATCGTCA TCACGCAGCT CGGGCTGTCC GATGCCGAGA TCCAGCACTA CAACACGAAC ATCATCTTCG CCATTGCAGA GAAGCTGTTT GGGCCGACCT GGGGCTACGT CGCGATCGTC GCGGTCTTGC TGAGCACGGT GGGAACCGTC GAAACCCAGA TGCTGCAGTT CACGCGCACG CTCTTTGCCA AAAGCCGCGA CGGCGCACTG CACGCGCGCT ATGCGCGCCT GCATCCGGTT TGGCGCACGC CGCACATCGC CATCTTCTTC ATCTGGCTGA CGGGGCTCGC ACTGCTGTTC GTGTCGTCTT ATCTGCCGAC GATCAACGTC ATCCTGCAGG ATTCGATTAC CGCCATCGGC TTCCAGATCT GCTTCTACCT CGGGCTCACC GGGCTGGCTT GCGGCTGGTA CTACCGCAAG GTGCTGACGC AGGGGCCGTG GGTCGCCATC ACCCATGTCA TCTGGCCGGT GGCAAGTGGG CTCTTCCTCT TCTTCATTGC GCTCTACAGC ATCCCGACCT TCGACTGGGT CACCAATGTG GTGGGCATGG GCGGCATCGC CATCGGTGTC ATTCCGCTGC TGCTGAACCG TAAAAAGATC TGGTCGGCTC GCTCCGCCTG A
|
Protein sequence | MDQSAKLNAD SLGIVESVIM GIAGTAPAYS IEITTSTIIG TAGTQSPASI LVCGLIMFGI AYAFINMNRA LASAGTSYSW VSMVFGRALG FFAGWALLVL CCVFMVSAMI PAANATLLIF DRPMMNNVHY VTLIAAAWLT FVSVVVVKGI KLTSYVQVLM TIVEGVILLG IIVASFMVFP RTPQHPFSWV WFWPFAFTPK LFANGALVAI FFFYGWDVTM NLSEETRDAN RTPGRAAFWS MVFLMVFFLV FIVITQLGLS DAEIQHYNTN IIFAIAEKLF GPTWGYVAIV AVLLSTVGTV ETQMLQFTRT LFAKSRDGAL HARYARLHPV WRTPHIAIFF IWLTGLALLF VSSYLPTINV ILQDSITAIG FQICFYLGLT GLACGWYYRK VLTQGPWVAI THVIWPVASG LFLFFIALYS IPTFDWVTNV VGMGGIAIGV IPLLLNRKKI WSARSA
|
| |