| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3403 |
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| Symbol | |
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| ID | 6289644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3563783 |
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| End bp | 3565252 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642626988 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_001900956 |
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| Protein GI | 187930469 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.335079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTACG GCGTCCTGCT GTCGAACTAC GAACGCACCG CAATGCACCG CGAAGGCGTG
GCACGCGCCT CGCAGCAGCA TCGGCTGTAT GCCTGCCTGC GGGCGGCCAT CCTGAGCGGA
CAGATCGAGG AAGGCACGCG CCTCGCGCCA TCGCGCACGC TGGCCGAAGA ACTCGGTATC
GCGCGCAACT CGGTGCTCTA CGCCTACGAG CAGCTCGCCA CGGAGGGCTT CGTACTGAGC
CGGCGGCAAG GCACGGTGGT GGCGCGCGTT GGCCTGCAGC AGACGCCTGC GCAGGCGCCC
GAAGCCGCGC CTGCGCTGTC GCACCGCGTA AAAGATCTGG AACGCCCGCG CGGCGACATG
GACGACCTGC TGCCCTTCCT GCCCGGCACG CCTGCGCTGG ATGAATTCCC GCTGGCGCAA
TGGCGCCGTT GCATGGAGCG CGGATGGCGC CGCATCGGTC CCGGGCAGAT GGGCTACGGC
CCGGTCGAAG GCAATGTCGC CCTGCGTCAG GCCGTGGCCG AATACCTGCG CGTTTCGCGC
GGCGTGCGCT GCGACGCGAC GCAGGTTTTC ATTACCGATG GCACGCAGAA CAGCCTCGAC
ATGTGCGCCC GCACGCTCGC CGATGCGGGC GACACCGCAT GGATCGAGAA CCCCGGGTAC
TACGGAGCGC GCGCCGCCTT GCAGGCCGCC GACATGCGCC TGGTACCGAT CAGCGTCGAC
GCCGATGGCC TCGCCCCGCG CGAGGAGGAC TGGCGCGACA CGCCGCCCAA GCTCATCTAC
ATCACGCCGT CGCACCAATA CCCGCTGGGC GCGGTGATGA GCCTGGAGCG CCGCCTTGCG
CTGATCCAGC ACGCGCGCGC TGCCGGCGCG TGGATCATCG AAGACGACTA CGACAGCGAG
TTCCGCCACA CGGGTGCGCC GCTATCCGCC GTGCAGGGCC TGACTGAGAA TGCGCCGGTC
ATCTATCTCG GCACGTTCAG CAAGATGCTG TTCCCGGCGC TGCGCCTCGG CTATATGGTG
GTGCCACCTG CGCTGGTGCC CGCGCTGAAG AAGACGGCCG GTGCGCTGAT GCTGCGCGGG
CGCGTGGCTG AGCAGCTCGC GCTGGCCGAG TTCATCGAGG CGGGACATTT CACGCGGCAC
CTTAGGCGCA TGCGTCGCCT CTATGGCGAG CGCCGCGATG CGCTGCAGGC CGCGATCGAG
CGTCACCTTG ATGGCATCGT CACCGTATCG GGCGGCGCGG GCGGCATGCA TCTTTCCGCG
CGGCTCGACG CCCCGGTGCC CGACACCGAA GTCAGCCGCG CCGCCCGTGC GCACGGAATG
GTGTTGCGGC CGCTGTCGCG CTTCTGCCTG CCGGGCACGC TGACCGCGCA ATACAACGGC
CTCGTGCTCG GCTACGGCAA CGTGCCGGCC GAAGCGATGG ACGGATTGGC CCTGCGCATA
CGCGACGTGA TCGAGAGCGT AGCCGGCTGA
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| Protein sequence | MDYGVLLSNY ERTAMHREGV ARASQQHRLY ACLRAAILSG QIEEGTRLAP SRTLAEELGI
ARNSVLYAYE QLATEGFVLS RRQGTVVARV GLQQTPAQAP EAAPALSHRV KDLERPRGDM
DDLLPFLPGT PALDEFPLAQ WRRCMERGWR RIGPGQMGYG PVEGNVALRQ AVAEYLRVSR
GVRCDATQVF ITDGTQNSLD MCARTLADAG DTAWIENPGY YGARAALQAA DMRLVPISVD
ADGLAPREED WRDTPPKLIY ITPSHQYPLG AVMSLERRLA LIQHARAAGA WIIEDDYDSE
FRHTGAPLSA VQGLTENAPV IYLGTFSKML FPALRLGYMV VPPALVPALK KTAGALMLRG
RVAEQLALAE FIEAGHFTRH LRRMRRLYGE RRDALQAAIE RHLDGIVTVS GGAGGMHLSA
RLDAPVPDTE VSRAARAHGM VLRPLSRFCL PGTLTAQYNG LVLGYGNVPA EAMDGLALRI
RDVIESVAG
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