| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3328 |
|---|
| Symbol | |
|---|
| ID | 6287104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 3482845 |
|---|
| End bp | 3483963 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642626913 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001900882 |
|---|
| Protein GI | 187930395 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.422123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.558302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTCTGG AACTGGACCA GGTTACGGCC ATGGTCGGGG CGCAGACGCA TCTGTACCCG
ACCAGCCTGC GGCTGGCGCC CGGCGCCATC AACGTGCTGC TGGGGCCGAC GCAAGCCGGC
AAGACCACGC TGATGCGCAT CATGGCCGGG CTTGACCGGC CGACCACCGG CCGCGTACTG
GTCGACGGCA AGGACGTGAC GGGCGTAGGG GTGCGCGATC GCAATCTGGC GATGGTGTAC
CAGCAATTCA TCAACTACCC GGCGATGACG GTGTACGACA ACATCGCCTC GCCGCTGCGC
CTGCAGGGCA CCAACAAGGG CGAGATCGAC TCGCGCGTGC GGGCCGTCGC CGCCAAGCTG
CACATCGAAC ATCTGCTGCA GCGCCTGCCG GCCGAGCTGT CGGGCGGACA GCAGCAACGC
TGCGCGCTGG CGCGGGCGCT GGTCAAGCGG GCACCACTGG TGCTGCTGGA CGAACCGCTC
GTCAATCTCG ACTACAAGCT GCGCGAAGAA TTGCGTGCCG AGTTGGCATC GCTCTTCGCT
GATGGCGGCA CGACCGTCGT GTACGCCACC ACGGAGCCGC AGGAAGCGCT GCTGCTGGGC
GGCCACACCG TCGTCATGCA TGAAGGCCGC GTGCTGCAAG ACGGCCCGAC GCTCGACATG
TACGAAGTGC CGGTGTCGGT CAACGCAGCG GCCATCTTCA ACGACCCGCC GATGAACGTG
CTGGACGCCA CCGTGGTGGA AGGCAACCAG ATCCGCCTGC CACAAGGCAT TGACGTTGCA
TGGACGCGCC CGCTGCCGAT GACGGCCGGC ACGCGCTGCC GCATCGGCCT GCGTCCGAGC
CACATCCGCC TGGCGCCGCG CAACGGCGGT GCCGTCGCGC TGCCGGGCAC GGTGGAGTTG
GCCGAGCTGT CGGGCTCCGA AACGTATCTG CACGTGCGCG CGCACGCCGC TGGCCAGTCG
AACACGATCG GCCTGGTCGC GCAGTTGCCG GGTGTGCATG AGTTCGAACT GGGCGCGGCG
CTGGACGTAT TTGTCGATCC GGCCGAACTG TTCCTGTTCG ACGATGCGGG CAAGCTGGTG
AGCGCGCCCA AGCAGGGAGG CGCACATGGC ACGCATTGA
|
|---|
| Protein sequence | MILELDQVTA MVGAQTHLYP TSLRLAPGAI NVLLGPTQAG KTTLMRIMAG LDRPTTGRVL
VDGKDVTGVG VRDRNLAMVY QQFINYPAMT VYDNIASPLR LQGTNKGEID SRVRAVAAKL
HIEHLLQRLP AELSGGQQQR CALARALVKR APLVLLDEPL VNLDYKLREE LRAELASLFA
DGGTTVVYAT TEPQEALLLG GHTVVMHEGR VLQDGPTLDM YEVPVSVNAA AIFNDPPMNV
LDATVVEGNQ IRLPQGIDVA WTRPLPMTAG TRCRIGLRPS HIRLAPRNGG AVALPGTVEL
AELSGSETYL HVRAHAAGQS NTIGLVAQLP GVHEFELGAA LDVFVDPAEL FLFDDAGKLV
SAPKQGGAHG TH
|
|---|
| |