| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3302 |
|---|
| Symbol | rpsL |
|---|
| ID | 6287557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3439860 |
|---|
| End bp | 3440237 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642626878 |
|---|
| Product | 30S ribosomal protein S12 |
|---|
| Protein accession | YP_001900856 |
|---|
| Protein GI | 187930369 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0048] Ribosomal protein S12 |
|---|
| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000119116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00857233 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCA TCAATCAACT GGTTCGCAAG CCCCGCGTCT CGGAAAAGCT GAAGAGCAAG
AGCCCGGCAC TTGAGAACTG CCCGCAGCGT CGCGGCGTGT GCACCCGCGT GTACACCACG
ACGCCGAAGA AGCCGAACTC GGCACTGCGT AAGGTCGCCA AGGTGCGCCT GACCAACGGT
TTCGAAGTCA TTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAAGAACA CAGCGTCGTG
CTGATCCGCG GCGGCCGTGT GAAGGACTTG CCGGGTGTGC GTTACCACAT CGTGCGCGGC
TCCCTTGACC TGCAAGGCGT CAAGGACCGT AAGCAAGCGC GTTCGAAGTA CGGCGCGAAG
CGTCCGAAGG CGGCCTAA
|
|---|
| Protein sequence | MPTINQLVRK PRVSEKLKSK SPALENCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQARSKYGAK
RPKAA
|
|---|
| |