Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3291 |
Symbol | rpsC |
ID | 6288567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3431058 |
End bp | 3431846 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642626867 |
Product | 30S ribosomal protein S3 |
Protein accession | YP_001900845 |
Protein GI | 187930358 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01009] ribosomal protein S3, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000159884 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000252184 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGACAGA AGATTCATCC GACTGGCTTC CGTCTGGCTG TCAGCCGTAA CTGGGCATCG CGTTGGTACG CGAGCAACAC CCAGTTTGCC GGCATGCTCA AGGAAGACAT CGAGGTTCGC GAGTTTCTGA AGAAGAAGCT GAAGAACGCG TCGGTGGGCC GCGTGGTCAT CGAGCGTCCG GCCAAGAATG CCCGTATCAC CATTTACAGC TCGCGTCCGG GCGTGGTGAT CGGCAAGAAG GGCGAGGACA TCGAACTGCT GAAGGCTGAA CTGCAGCGTC GCATGGGCGT GCCCGTGCAC GTGAACATCG AAGAAATCCG CAAGCCGGAA GTCGATGCGC AGCTGATCGC AGATTCGATC ACGCAGCAGC TTGAGCGCCG CATCATGTTC CGTCGCGCTA TGAAGCGCGC GATGCAGAAC GCGATGCGTC TGGGTGCCCA AGGCATCAAG ATCATGAGCT CGGGCCGTCT GAACGGCATC GAAATCGCTC GTACCGAGTG GTACCGCGAA GGCCGTGTGC CCCTGCACAC GCTGCGCGCC GATATCGACT ACGGCTTCTC CGAAGCGGAA ACCACCTACG GCATCATCGG TGTCAAGGTG TGGGTGTACA AGGGTGACCA TCTCGGTCGC AACGACGCAC CCGTCGTGGA AGAGCCGCAA GAAGAGCGTC GCAAGCGTCC GGGTCGCCCG GAAGGTCGTC GCCGTGAGGG CGAAGGTCGC CCGGCCGGTC AGCGCCGCGG TGCTGGTGCG GGTGCCCGTC GTGGCACCGA CGCGAAGACT GGAGAATAA
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Protein sequence | MGQKIHPTGF RLAVSRNWAS RWYASNTQFA GMLKEDIEVR EFLKKKLKNA SVGRVVIERP AKNARITIYS SRPGVVIGKK GEDIELLKAE LQRRMGVPVH VNIEEIRKPE VDAQLIADSI TQQLERRIMF RRAMKRAMQN AMRLGAQGIK IMSSGRLNGI EIARTEWYRE GRVPLHTLRA DIDYGFSEAE TTYGIIGVKV WVYKGDHLGR NDAPVVEEPQ EERRKRPGRP EGRRREGEGR PAGQRRGAGA GARRGTDAKT GE
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