Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_3225 |
Symbol | hisH |
ID | 6287348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 3372272 |
End bp | 3372925 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642626801 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_001900779 |
Protein GI | 187930292 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGA TCGCAATCGT CGATTACGGC ATGGGCAATC TGCGCTCGGT GGCGCAAGCC CTGATGGCCG TTGCTCCGGA GGCCGATGTG CGCATCAGTG CGCAAGCGGA TGAAATTCGT TCGGCCGACC GTGTGGTGCT GCCAGGGCAG GGCGCCATGC CCGACTGCAT GGCCGCGTTC GACCAGTCCG GCCTGCGCGA TGCTGTGCTG GAGGCATCGC GCAGCAAGCC GATGCTGGGC GTATGTGTGG GCGAGCAGAT GCTGCTCGAG CGCAGCACCG AGGCGCGCCC CGGGCAGCCG TACACGGAAG GGTTGGGCCT CATCAAGGGC GATGTGGTCC GCTTTGAGCT GGACGGCCAG TTGCAGCCGG ACGGTTCACG GTACAAAGTG CCTCAGATGG GCTGGAACCG CGTGCACCAG AGTCGTGCCC ACGCCCTTTG GGAAGGTGTG CCGGACCAGA GCTACTTCTA TTTCGTGCAC AGTTACTACG CGCGGCCCGC CAATGCCGAC GAATCGGTCG GAGAGACCGA ATACGGCGTG CGGTTTACCT CCGCCATCGC CCGGGATAAT ATTTTTGCAA CACAGTTTCA CCCGGAAAAA AGTGCGCAAG CCGGGCTGCA GATCTACCGG AACTTCGTGC ACTGGAACCC GTGA
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Protein sequence | MTKIAIVDYG MGNLRSVAQA LMAVAPEADV RISAQADEIR SADRVVLPGQ GAMPDCMAAF DQSGLRDAVL EASRSKPMLG VCVGEQMLLE RSTEARPGQP YTEGLGLIKG DVVRFELDGQ LQPDGSRYKV PQMGWNRVHQ SRAHALWEGV PDQSYFYFVH SYYARPANAD ESVGETEYGV RFTSAIARDN IFATQFHPEK SAQAGLQIYR NFVHWNP
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