Gene Rpic_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3225 
SymbolhisH 
ID6287348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3372272 
End bp3372925 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID642626801 
Productimidazole glycerol phosphate synthase subunit HisH 
Protein accessionYP_001900779 
Protein GI187930292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGA TCGCAATCGT CGATTACGGC ATGGGCAATC TGCGCTCGGT GGCGCAAGCC 
CTGATGGCCG TTGCTCCGGA GGCCGATGTG CGCATCAGTG CGCAAGCGGA TGAAATTCGT
TCGGCCGACC GTGTGGTGCT GCCAGGGCAG GGCGCCATGC CCGACTGCAT GGCCGCGTTC
GACCAGTCCG GCCTGCGCGA TGCTGTGCTG GAGGCATCGC GCAGCAAGCC GATGCTGGGC
GTATGTGTGG GCGAGCAGAT GCTGCTCGAG CGCAGCACCG AGGCGCGCCC CGGGCAGCCG
TACACGGAAG GGTTGGGCCT CATCAAGGGC GATGTGGTCC GCTTTGAGCT GGACGGCCAG
TTGCAGCCGG ACGGTTCACG GTACAAAGTG CCTCAGATGG GCTGGAACCG CGTGCACCAG
AGTCGTGCCC ACGCCCTTTG GGAAGGTGTG CCGGACCAGA GCTACTTCTA TTTCGTGCAC
AGTTACTACG CGCGGCCCGC CAATGCCGAC GAATCGGTCG GAGAGACCGA ATACGGCGTG
CGGTTTACCT CCGCCATCGC CCGGGATAAT ATTTTTGCAA CACAGTTTCA CCCGGAAAAA
AGTGCGCAAG CCGGGCTGCA GATCTACCGG AACTTCGTGC ACTGGAACCC GTGA
 
Protein sequence
MTKIAIVDYG MGNLRSVAQA LMAVAPEADV RISAQADEIR SADRVVLPGQ GAMPDCMAAF 
DQSGLRDAVL EASRSKPMLG VCVGEQMLLE RSTEARPGQP YTEGLGLIKG DVVRFELDGQ
LQPDGSRYKV PQMGWNRVHQ SRAHALWEGV PDQSYFYFVH SYYARPANAD ESVGETEYGV
RFTSAIARDN IFATQFHPEK SAQAGLQIYR NFVHWNP