Gene Rpic_3207 details

Gene Information

• Locus tag: Rpic_3207
• Symbol: mscL
• ID: 6289682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia pickettii 12J
• Kingdom: Bacteria
• Replicon accession: NC_010682
• Strand: +
• Start bp: 3355622
• End bp: 3356050
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 642626783
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_001900761
• Protein GI: 187930274
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 33
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCACTGA TGCAAGACTT CAAAAAATTC GCGATGCGCG GCAACGTGAT CGACCTCGCA 
GTAGGCGTGA TCATCGGTGC GGCGTTCGGC AAAATCGTCG ATTCGCTCGT CAATGATCTG 
ATCATGCCGC TGATTAGCCG CATCGTTGGC AAGCTGGATT TCTCGAACCT GTTCATCCAG 
CTGGCAGAGG CGCCCGCCGG TGTGCCGCAT ACCCTGGCTG ATTTGAAGAA GGCAGGCGTG 
CCGGTCTTCG CCTATGGCAA CTTCATCACC GTGGCGGTCA ATTTTCTGAT TCTGGCGTTT 
ATCGTATTTC TGATGGTGCG CGCCATCACG CGCATGATCG ACGCCAACCC GCCGGCTGCC 
CCCGCCGAAA CACCAGAAGA CATCCAACTG CTGCGCGAGA TTCGCGACAG CCTGAAGAAC 
AAGCCGTAA 

 

Protein sequence

MALMQDFKKF AMRGNVIDLA VGVIIGAAFG KIVDSLVNDL IMPLISRIVG KLDFSNLFIQ 
LAEAPAGVPH TLADLKKAGV PVFAYGNFIT VAVNFLILAF IVFLMVRAIT RMIDANPPAA 
PAETPEDIQL LREIRDSLKN KP