| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3175 |
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| Symbol | |
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| ID | 6286758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3328351 |
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| End bp | 3330255 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642626750 |
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| Product | SMC domain protein |
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| Protein accession | YP_001900729 |
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| Protein GI | 187930242 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0609812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000000447606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCTCC AAACGATTCG GCTATCCAAC TTCCAGTCTT TCGGTGAGGC ACCAACCGAA
GTCGTGCTTG AAGACATCAC CTACCTCATC GGGCCCAATG GATCGGGGAA AACAGCCGCG
CTTCAGGCCT TGTGCCGGCT CTTTGCCTTC GATCCATCAC TGCGCCGGAT CCTGCGCTCT
GACTTTTACG TCCCATTCAA TGAGGAAGCC CCGCCGGCTG AGCGTCAGCT CTGGGTAGAG
GCTGACTTCC TGTTCCCAGA ACTCGGCGAA GACGAGGACA ACAGCACTGT TGCGCCTCAT
TTTGGCCACA TGCGCCTCGA CGAAGTTGAT GGCACGCCGC GTGTGCGTTT TCGCCTCACC
GCCACCATGG GGCTGGATGG AGACATAGAG GAAAGCTTGG TCTATGTGCT GGACATCAAT
CCTGACGGCT CGCCATTGAC CACCGCACAG GTGCTCAGAT CTGAGCGCAA CCATATCCAC
GTCCACTATC TGCCCGCCCG GCGTGACCCC GCGGATCACA TTGCCTACGG CGCCAATGCT
TTGCTTGGGC GCATGCTGCG TGCAGTGAAC TGGGATGCAG AGCGGAGTGT CATCAAGGGC
CTCACCGACC AAATCAGCGA CAGCTTGGCG GCCAACCCGT CAATCAATGC GTTCAGCACA
AGCTTGAAAA CGGCATGGGG TGGTTTGCAC AAGGGCAGCT TCTTTGCCGA TCCGAAGCTC
ACTTTTGTAG CGTCTGAGAT CGAGGCCTTG TTAAGGCACA TGTCGGTCTC TTTCACCCCT
GGTCACGATG AGCAGCTGGT TGACTTCTCA CGACTGAGCG ACGGCCAGAA ATCGATGCTG
TATCTGTCGC TCGTGTTGTC TTCACAGGCC ATCGGTCGAG CTGTCCTGGC TGCAGAAGAC
AAGTCATTCG ACGCAGATAA GTTGCGCCCA CCCGTCTTCA CGGTGGTAGC GGTCGAAGAG
CCAGAAAACA GCCTGTCGCC GCATTACCTT GGACGGATCG TCAATGCCCT CAACGGGATG
ACCGGCAACG GCGACGCACA AGCGCTGATC GCCACCCATG CCCCGTCGAT GCTGCGGCGC
GTCGACCCAG AACGTATCCG GTATCTGCGT CTAACCCAAG AACGAACATC GCGCGTCACG
CATATCCAGC TGCCAGACAC CACAGATGAA GCTCACAAGT TTGTGCGTGA GGCCGTGCAG
GCCTTTCCGG AAGTCTATTT CTCGCGACTC GTGGTACTTG GCGAGGGAGA CAGTGAAGAA
ATCGTGTTGC CACGCCTCCT ACAGGCCAAA GGGGCACCGG TTGATGAGTC AGCAGTCTCG
ATAGCGCCCT TGGGTGGACG TCACGTTAAT CATTTCTGGC GCCTACTGTC TGCCCTACAG
ATTCCCTATC TGACGCTGCT TGATCTGGAT GTCGCCCGCT ACCAGGCCGG GTGGGGGCGA
ATCAAGTACG CCAATAACCA GTTGGCAGCG TACGAGCCGA GTAAGGTACT TCCCGCAGAC
CATGGCATTC CCAGTTGGAA TGATGCAACT CACAAAGTCC GAGCCTATGG GCACTACAAC
ACTCTGCTCG AAGAGCGTGG TGTGTATTTC TCGTTCCCTA TGGACCTGGA TTTTTCGATG
CTGCTCGCCT ACCCGGATGC CTACGGTGTG GAGAAGGAAA AGCCTGACGA GTCAACGATT
AAGGCCGTGC TAGGGAAAAG CCATTACGAC GCAAGCCAAT ACAACGAGGA CGAACAAAAA
CTGTTCGGCA CTTACCACCG TAGCTTCAAG CTTGGCAGCA AGCCGGCCGC GCACATTGAT
GCGCTCGCCA AGCTCAGCGA TGCGGACCTG CTCGCGAACA TGCCCGAATC ACTTGGACGC
TTGGCCGATG CCGTCATCGC CAAGCTCGCG GAGTTGCCGG AGTGA
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| Protein sequence | MKLQTIRLSN FQSFGEAPTE VVLEDITYLI GPNGSGKTAA LQALCRLFAF DPSLRRILRS
DFYVPFNEEA PPAERQLWVE ADFLFPELGE DEDNSTVAPH FGHMRLDEVD GTPRVRFRLT
ATMGLDGDIE ESLVYVLDIN PDGSPLTTAQ VLRSERNHIH VHYLPARRDP ADHIAYGANA
LLGRMLRAVN WDAERSVIKG LTDQISDSLA ANPSINAFST SLKTAWGGLH KGSFFADPKL
TFVASEIEAL LRHMSVSFTP GHDEQLVDFS RLSDGQKSML YLSLVLSSQA IGRAVLAAED
KSFDADKLRP PVFTVVAVEE PENSLSPHYL GRIVNALNGM TGNGDAQALI ATHAPSMLRR
VDPERIRYLR LTQERTSRVT HIQLPDTTDE AHKFVREAVQ AFPEVYFSRL VVLGEGDSEE
IVLPRLLQAK GAPVDESAVS IAPLGGRHVN HFWRLLSALQ IPYLTLLDLD VARYQAGWGR
IKYANNQLAA YEPSKVLPAD HGIPSWNDAT HKVRAYGHYN TLLEERGVYF SFPMDLDFSM
LLAYPDAYGV EKEKPDESTI KAVLGKSHYD ASQYNEDEQK LFGTYHRSFK LGSKPAAHID
ALAKLSDADL LANMPESLGR LADAVIAKLA ELPE
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