Gene Rpic_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3158 
Symbol 
ID6289766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3308920 
End bp3309144 
Gene Length225 bp 
Protein Length74 aa 
Translation table11 
GC content63% 
IMG OID642626733 
Productzinc finger CDGSH-type domain protein 
Protein accessionYP_001900712 
Protein GI187930225 
COG category[S] Function unknown 
COG ID[COG3369] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.000868245 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGACG ACGTTGTCAT CACGGTCCGC AACAACGGGC CGTACCATAT CAAGGGAACC 
TTCCGGGTCG CCACCCAGGG CGGGCGCGAG TTGGCCGTAG AAGAAGGCCA GGCATGGCTG
TGCCGCTGCG GGCACTCCTT GAACAAGCCG TTCTGTGACG GGTCGCACAA GCGCGTCGAG
TTTGACAGCA ACCTCGACGC GCCTGTGCCC GATGCGCCTG CTTAA
 
Protein sequence
MADDVVITVR NNGPYHIKGT FRVATQGGRE LAVEEGQAWL CRCGHSLNKP FCDGSHKRVE 
FDSNLDAPVP DAPA