| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3138 |
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| Symbol | |
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| ID | 6286057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3286288 |
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| End bp | 3286761 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626713 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_001900692 |
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| Protein GI | 187930205 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.82617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.443685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTCG CCCGCCCTCT TCGCTTGAAC TGCAGCCGCC TTGGCGCGGC GCTTGTGCTG
GCCGCCTCCA GCGTTGCTGC GCACGCCGCC TCGGGCGATT GCTTTGAGCA GGCCGGTACC
TATCAGGGCG TCAACCCGAC GGTGCTGCGC GCCATCGTGT GGTTTGAATC GAAGGGTGAT
GCGGGCGCCA TCCACCGCAA CGCAGATGGC TCGGTCGACA TCGGCCAGGC GCAGATCAAT
TCAATCCACT TCAGCACGCT GGCGCGCTAC GGCGTGCCGC GCCGTGCACT GACCGACGCC
TGCGTCAACG TGTTCGTAGC GGCCTGGCTG CTCAAGCAGA AGATGGTCCG CCATGGAAAT
ACATGGCGGG CCATCGGCGC GTATCACTCG GAAACGCCTG CCCACCGCGA CGCCTATGCG
CGCAGCATCC AGCGGGTGCT GATGTCGTGG GGGGAATTGC GGGCCGACCG CTGA
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| Protein sequence | MPLARPLRLN CSRLGAALVL AASSVAAHAA SGDCFEQAGT YQGVNPTVLR AIVWFESKGD
AGAIHRNADG SVDIGQAQIN SIHFSTLARY GVPRRALTDA CVNVFVAAWL LKQKMVRHGN
TWRAIGAYHS ETPAHRDAYA RSIQRVLMSW GELRADR
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