| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3079 |
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| Symbol | |
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| ID | 6288850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 3212884 |
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| End bp | 3215688 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626650 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001900634 |
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| Protein GI | 187930147 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGG GCCTTCTCAA GAAGATTTTC GGCAGCCGTA ATGAACGGCT GATCAAACAG
TACCGCCGCA AGGTGGCGCA GATCAATGCG CTCGAGCCCA AGTTCGAAGC GCTCTCCGAT
GCCGAGTTGC AGGCCAAGAC CGAAGAATTC CGTCAACGCT TTGCCAAGGG CGAGACGCTC
GACGCGCTCC TGCCCGAAGC GTTCGCTGTG TGCCGCGAGG CCAGCAAGCG TGTGATGAAG
ATGCGGCACT TCGACGTGCA GCTGATCGGT GGCATGGTGC TGCACGACGG CAAGATCGCC
GAAATGCGCA CGGGTGAAGG CAAGACGCTG ACCGCCACGC TGGCCGTATA CCTGAACGCC
ATTTCCGGCC AGGGCGTGCA CGTCGTGACG GTCAACGATT ACCTGGCTCA GCGCGATGCC
GAGTGGATGG GCCGCCTGTA TAACTGGCTG GGCCTGTCGG TGGGGGTCAA CCTGACCACC
ATGGACCATG ACCAGAAGCA GGCTGCCTAC GCGTCGGACA TCACCTACGG CACCAACAAC
GAGTTCGGCT TCGACTACCT GCGCGACAAC ATGGTGTACG ACGCCGGCCA GCGCGTGCAG
CGTCCGCTGA ACTACGCGAT CGTCGACGAG GTGGACTCGA TCCTGATCGA TGAAGCGCGT
ACCCCGCTGA TCATCTCTGG CCAGGCTGAA GACCACACCG ACCTGTACCG CCGCATGAAC
GGCATCCCGG CGCAGCTCAC GCGCCAGATC GGCGAAGAGA AGTCGGATGG TACGGGTGTC
GAGAAGCCAG GCGACTACTA CGTCGACGAA AAATCGCACC AGGTCTACCT GACCGAATCC
GGTCACGAGA AGGCTGAGCA GATCCTGCTG CAAGCCGGCT TGATCGGCGA GGGCGAGTCG
CTCTACGCGC CGCAGAACAT CACGCTGATG CACCACCTGT ACGCCGCCCT GCGTGCGCAC
AGCCTGTTCT TCCGCGATCA GCACTACGTT GTGCAGAACG GTGAAGTGGT GATCGTCGAT
GAATTCACCG GCCGCCTGAT GTCGGGCCGC CGTTGGTCCG ACGGTCTGCA CCAGGCCGTG
GAAGCCAAGG AAGGTGTGCA GATCCAGCAG GAAAACCAGA CGCTGGCGAC CATCACGTTC
CAGAACTACT TCCGCATGTA CAACAAGCTG TCGGGCATGA CCGGTACGGC GGACACGGAA
GCGTATGAAT TCCAGGAGAT CTACGGGCTG GAAACCGTGG TGATCCCGAC CAACCGCCCC
CCGCAGCGCA AGGACTTGCA GGATCAGATC TACAAGACCT CGAAGGAGCG CTACGACGCC
GTCATTCGCG ACATTCGCGA TTGCTACGAG CGTGGCCAGC CGGTGCTGGT GGGCACGACG
TCCATCGAAA ACTCCGAACT GCTGTCGAAC CTGCTGAACC AGGCCAAGCT GCCGCACCAG
GTGCTGAACG CGAAGCAGCA CGAGCGTGAG GCCGAGATCA TCGCGCAGGC CGGTCGCCCG
AAGATGATCA CCATCGCCAC CAACATGGCG GGCCGTGGTA CCGACATTGT GCTGGGCGGC
AATGTGGAGA AGCAGTCCGG CTTCGTGATG GCCGACGAGT CGCTCTCCGA CGCAGAAAAG
GCCTCGCGCG TGAAGACGTT GCAGGACGAA TGGCAATCGC TGCACGAGCA GGTGAAGGCT
GCGGGCGGTC TGCACATCGT CGGCACCGAG CGCCATGAGT CTCGCCGGAT CGACAACCAG
TTGCGTGGCC GTGCCGGCCG TCAGGGTGAT CCGGGTTCGT CGCGCTTCTA TCTGTCGCTG
GACGACCAGC TGCTGCGCAT CTTCGCGGGC GACCGCGTGC GCGCGATCAT GGATCGCCTG
AAGATGCCCG AAGGCGAGCC GATCGAAGCC GGCATCGTCA CGCGCTCGAT CGAATCGGCG
CAGCGCAAGG TTGAAGGCCG CAACTTCGAT ATCCGCAAGC AACTGCTGCA GTACGACGAC
GTCTCCAACG ATCAGCGCAA GGAACTCTAC AAGCTGCGCA ACGAGATTCT CGAAGCGCAG
GACGTGGGCG ACCTCGTCAA GAACCTGCGT GAATCCGTGT TCACGGAGCT CTTCCGCACG
TATGTGCCGG CCGAGACCAT GGAAGAGCAG TGGGATGTCG CCGGTCTGGA AAAGACGCTG
CGCGAGGACT GGGGTGTCGA TCAGCCGCTG GTCAAGACGC TGGAAGCGGC GCAGTCGATC
GAAGACGAAG ACCTGCTTAA GATCGTGCTG GACGCCGCCG AGGCGGTGTA CGAAGGCAAG
GTGGCGCAGG TTGGCCGTGA GTCCTTCGCC GGCTTCGAGC GTTCGGTGAT GCTGCAAAGC
CTCGACACGC ACTGGCGTGA GCACCTGGCG GCGCTCGACA TGCTGCGCCA GGGTATCCAC
CTGCGCGGCT ATGCGCAGAA GGACCCGAAG CAGGAGTACA AGCGCGAGTC GTTCGAACTG
TTCGGCCGCT TGCTCGATAC CATCCGCAAC GAAGTCACGC GTATTGTCTT CACGGTGCGC
ATCCAGTCGC AGGAAGAGCT GGAGCAAGCC TCCGAGCAGA TCGAAGAAGA TCTTTCCGCG
CTGACCAACC TGCAGTACAA GCACGACGAG TTCAGCGAAC TGGCCGAAGT GGCTGCAGGT
GATGCGGAGA TCCATGGCGC AACGCCGGCC ATGGCTGCAT CGCGTTCGGC GGCATCGGCC
GCTGCTGCCG CACTGGCTGG CGAAGTGCCG AAGGTTGGCC GCAACGATCC GTGCCCATGC
GGTTCGGGCA AGAAGTACAA GCAGTGCCAC GGCAAACTTG TCTGA
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| Protein sequence | MITGLLKKIF GSRNERLIKQ YRRKVAQINA LEPKFEALSD AELQAKTEEF RQRFAKGETL
DALLPEAFAV CREASKRVMK MRHFDVQLIG GMVLHDGKIA EMRTGEGKTL TATLAVYLNA
ISGQGVHVVT VNDYLAQRDA EWMGRLYNWL GLSVGVNLTT MDHDQKQAAY ASDITYGTNN
EFGFDYLRDN MVYDAGQRVQ RPLNYAIVDE VDSILIDEAR TPLIISGQAE DHTDLYRRMN
GIPAQLTRQI GEEKSDGTGV EKPGDYYVDE KSHQVYLTES GHEKAEQILL QAGLIGEGES
LYAPQNITLM HHLYAALRAH SLFFRDQHYV VQNGEVVIVD EFTGRLMSGR RWSDGLHQAV
EAKEGVQIQQ ENQTLATITF QNYFRMYNKL SGMTGTADTE AYEFQEIYGL ETVVIPTNRP
PQRKDLQDQI YKTSKERYDA VIRDIRDCYE RGQPVLVGTT SIENSELLSN LLNQAKLPHQ
VLNAKQHERE AEIIAQAGRP KMITIATNMA GRGTDIVLGG NVEKQSGFVM ADESLSDAEK
ASRVKTLQDE WQSLHEQVKA AGGLHIVGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
DDQLLRIFAG DRVRAIMDRL KMPEGEPIEA GIVTRSIESA QRKVEGRNFD IRKQLLQYDD
VSNDQRKELY KLRNEILEAQ DVGDLVKNLR ESVFTELFRT YVPAETMEEQ WDVAGLEKTL
REDWGVDQPL VKTLEAAQSI EDEDLLKIVL DAAEAVYEGK VAQVGRESFA GFERSVMLQS
LDTHWREHLA ALDMLRQGIH LRGYAQKDPK QEYKRESFEL FGRLLDTIRN EVTRIVFTVR
IQSQEELEQA SEQIEEDLSA LTNLQYKHDE FSELAEVAAG DAEIHGATPA MAASRSAASA
AAAALAGEVP KVGRNDPCPC GSGKKYKQCH GKLV
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