| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3070 |
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| Symbol | |
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| ID | 6286994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3204581 |
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| End bp | 3206308 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642626641 |
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| Product | type IV-A pilus assembly ATPase PilB |
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| Protein accession | YP_001900625 |
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| Protein GI | 187930138 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02538] type IV-A pilus assembly ATPase PilB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCG GACTTGCTCT AGCGCAGAGC CGGCGGATCG CGCCGACGCT ACTTACCCAA
CTCGAACAGA GCGCGCGTGA AAAACGCACG CAACTGATCG ACGAACTGGT GGGCAGCGGG
ATCATGAGTG CGCACGACCT CGCCGTGTTT GTGGCCGGCA AGTACCAGAT GCCGCTGCTC
GACCTTGCGC AGTACAAGCT CGACACCGTG CCGGCCGTGC TGTCGGCCAA CAAGCACTTT
GCCCAGTTGC GCCTGTTGCC GCTGGGCCGT CGCGAGAACC GCCTCATCCT CGCCACGTCC
GACCCGAGCG ATCCGAAGCC GATCGAAGAG CTGCGTCAGA AGATGAACGT AGCCATCGAA
ACGGTCATCG TCGAACACGA CAAGCTGGTT CGCCAACTCA GCCTCGCCAA TGAGGCGCCG
GCCGAGATCA AGTCGCTCTT CCCCAAGCAG GAGGCCACGC AGATCGAATA CGATGCGGGC
GCTGCCGCCG CCACGCGTCG CACCACCCCC GACGGCATCG ACGATGCCCC TGTGGTGCGC
TTCCTGCAGA AGCTCTTTAC CGAAGCCTTG CTGCGCGGCG CATCGGACTT GCATTTCGAG
CCCTTTGAAA CGTTTTACCG CGTACGTTTC CGCATCGACG GCATCCTCGC GCAGGTCGCG
CAGCCGCCGC TGGATATCCG CGACAAGATC GCGACCCGCA TCAAGGTGCT CTCGCGCCTG
GACATCTCGG AAAAGCGCGT GCCGCAAGAC GGCCGCATGA AGCTGCTCAT CACCGTCCCG
AAAGACCGCA AGGACAAGGA CAACAAAGAG ACGATCGAGC GCGCCATCGA CTTCCGGGTG
TCGACGCTGC CGACGCTGTT CGGCGAAAAG ATCGTGATCC GGATTCTGGA GTCGTCCACC
GAGCGGCTCG ATATCGACCA GCTTGGCTAT GAGCCGGAGC AAAAGCAGTT GCTGCTCGAC
GTAATCAAGC GGCCGTACGG CATGGTGCTG GTGACGGGGC CAACCGGATC GGGCAAAACC
GTGTCGCTGT ACACGTTCCT GAACAGGCTG AACCAGGGCG ACATCAATAT CTCCACCGCC
GAAGACCCAG CGGAAATCCA GTTGCCCGGC ATCAACCAGG TCAACGTGAA CGACAAGGCT
GGGCTGACCT TTGCGGCGGC GCTGAAGTCG TTCCTGCGGC AGGATCCGGA CATCATCATG
GTGGGCGAAA TCCGAGATCT GGAGACGGCC GACATCTCGA TCAAGGCTGC GCAGACCGGT
CACCTGGTGT TTTCCACGCT GCACACCAAC GACGCACCGA CCACACTGAC CCGCCTGATG
AACATGGGGG TGGCGCCGTT CAACATCGCG TCGTCGGTGC TGATGATCAC GGCGCAGCGT
CTGGGGCGCC GGCTGTGCAA GGATTGCAAG AAGCCGGGTC CGCTGCCCAA GGAAACGCTG
CTCGACGCGG GTTTTACCGA AGCGGACCTC GACGGCTCCT GGCAGCCGTA TCACCCGGTC
GGTTGCGAAA CCTGCAACGG CAGCGGCTAC AAGGGCCGGG TCGGCATCTA CCAGGTCATG
CCGATTACCG AGGCGATCCA GGAAATCATT CTCACGCATG GCACGGCGCT GCAGATTGCC
GAGCAGGCGC GCAAAGACGG CGTGATGTCG CTACGCGAAT CGGGCCTGCG AAAAGTGAAG
CAGGGGCTGA CTTCCCTCGA GGAAGTGCTG GCCACAACGA ACCAATAA
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| Protein sequence | MTLGLALAQS RRIAPTLLTQ LEQSAREKRT QLIDELVGSG IMSAHDLAVF VAGKYQMPLL
DLAQYKLDTV PAVLSANKHF AQLRLLPLGR RENRLILATS DPSDPKPIEE LRQKMNVAIE
TVIVEHDKLV RQLSLANEAP AEIKSLFPKQ EATQIEYDAG AAAATRRTTP DGIDDAPVVR
FLQKLFTEAL LRGASDLHFE PFETFYRVRF RIDGILAQVA QPPLDIRDKI ATRIKVLSRL
DISEKRVPQD GRMKLLITVP KDRKDKDNKE TIERAIDFRV STLPTLFGEK IVIRILESST
ERLDIDQLGY EPEQKQLLLD VIKRPYGMVL VTGPTGSGKT VSLYTFLNRL NQGDINISTA
EDPAEIQLPG INQVNVNDKA GLTFAAALKS FLRQDPDIIM VGEIRDLETA DISIKAAQTG
HLVFSTLHTN DAPTTLTRLM NMGVAPFNIA SSVLMITAQR LGRRLCKDCK KPGPLPKETL
LDAGFTEADL DGSWQPYHPV GCETCNGSGY KGRVGIYQVM PITEAIQEII LTHGTALQIA
EQARKDGVMS LRESGLRKVK QGLTSLEEVL ATTNQ
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