Gene Rpic_3051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3051 
Symbol 
ID6288626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3184964 
End bp3185560 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID642626621 
ProductN-acetyl-anhydromuranmyl-L-alanine amidase 
Protein accessionYP_001900606 
Protein GI187930119 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAAC GGTTGCACGT CGGCGCTGAC GGATGGGTGG ATGGCGCGCG CCGCCATCCC 
TCGCCGAATA TCGACGCACG GCCCGAAGGC ATGCCCATCG ACCTGATCGT GCTGCACAAC
ATCAGCCTGC CGCCTGCGCA ATCCGCGGCC GACTTCGGCA CCTGCCACGT GCTCGACTTC
TTCACCAACA CGCTTGACTG CGACGCGCAT CCGTACTTCG ATCAGTTGCG CGGCGTGCGC
GTGTCGGCGC ATTTCTTCGT CCGCCGCACG GGCGAATGCG TGCAATTTGC TTCGTGCGAC
GCGCGTGCCT GGCATGCCGG TGCGTCGGAC TTCTTCGGCC GCACGCGCTG CAACGATTTC
TCGATCGGCA TCGAAATCGA GGGCACCGAT GATCTGCCCT TCACGCCTGA GCAGTACGTC
GCTACGGCGT CGCTTGTGCG GGCGATCTGT GCGGCGTATC CGATCGCAGC AATCGCCGGT
CACTCGGACA TTGCGCCGGG CCGCAAGACG GACCCGGGAC CGCATTTCGA CTGGGTGCAT
CTGCGCGCGC TCGGCGGGTT CAACGCGGCG TTGTTTCCGT ATCAGCACGC GCTCTGA
 
Protein sequence
MPERLHVGAD GWVDGARRHP SPNIDARPEG MPIDLIVLHN ISLPPAQSAA DFGTCHVLDF 
FTNTLDCDAH PYFDQLRGVR VSAHFFVRRT GECVQFASCD ARAWHAGASD FFGRTRCNDF
SIGIEIEGTD DLPFTPEQYV ATASLVRAIC AAYPIAAIAG HSDIAPGRKT DPGPHFDWVH
LRALGGFNAA LFPYQHAL