Gene Rpic_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_3030 
Symbol 
ID6288392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3157071 
End bp3157538 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content63% 
IMG OID642626600 
Product3-dehydroquinate dehydratase 
Protein accessionYP_001900585 
Protein GI187930098 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGACA AACCCATCGC CAAAGCGCTT CGCAACGTGC TCGTACTGCA CGGCCCGAAC 
CTCAATTTGC TTGGGACGCG CGAACCGGAA GTCTATGGTG CAACCACCCT CGCCGACATC
AATACCGCCT TGGTCGAACG CGCTACGGCG CGCGGCGTGA CGCTGGCGCA CTTCCAGTCG
AACCACGAAG GCGCACTGGT CGACCGCATC CATGCCGCCA AGAGCGAAGG CATCGAATTC
ATCATCATCA ATCCGGCCGC CTACACGCAC ACGAGTGTGG CCCTGCGCGA TGCGCTGGCC
GGCGTGGTGA TTCCGTACAT CGAAGTGCAT CTGTCCAACG TGCATCGTCG TGAGCCGTTC
CGCCACCATT CGTATCTGGC GGACCAGGCG GTGGGCGTGA TTTGCGGGCT GGGCTGGCGC
GGCTATCTGG CGGCGCTGGA CTTCGCAATC GACCAACACG GCGGCTGA
 
Protein sequence
MADKPIAKAL RNVLVLHGPN LNLLGTREPE VYGATTLADI NTALVERATA RGVTLAHFQS 
NHEGALVDRI HAAKSEGIEF IIINPAAYTH TSVALRDALA GVVIPYIEVH LSNVHRREPF
RHHSYLADQA VGVICGLGWR GYLAALDFAI DQHGG