| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_3005 |
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| Symbol | |
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| ID | 6286086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 3132158 |
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| End bp | 3133894 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642626575 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001900560 |
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| Protein GI | 187930073 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAT CGAAACCCAA GCTGCGCTCG GCCCAATGGT TCGGCACTGC CGATAAAAAC
GGCTTCATGT ATCGAAGCTG GATGAAGAAC CAGGGCATCC CCGACCACGA ATTCGACGGC
CGCCCGATCA TCGGCATCTG CAATACCTGG TCGGAGCTGA CGCCGTGCAA CGCGCATTTC
CGCAAGCTGG CCGAACACGT CAAGCGCGGC ATTTACGAGG CGGGCGGCTT TCCGGTGGAG
TTTCCGGTGT TCTCCAACGG CGAATCGAAC CTGCGCCCGA CCGCCATGCT CACGCGCAAC
CTTGCGGCCA TGGATGTGGA AGAGGCGATT CGCGGCAACC CGATCGACGC GGTGGTGCTG
CTCACCGGCT GCGACAAGAC CACGCCCGCC CTGCTGATGG GCGCAGCCAG CTGCGACGTG
CCGGCGATCG TCGTGACGGG CGGGCCGATG CTCAACGGCA AGCTCGACGG CAAGAACATC
GGCTCGGGCA CGGCGGTGTG GCAGTTGCAC GAATCGCTCA AGGCGGGCGA GATCGACCTG
CATCACTTCC TGTCGGCGGA AGCCGGGATG TCACGCTCGG CCGGCACGTG CAACACGATG
GGCACGGCGT CCACCATGGC ATGCATGGCG GAAGCGCTCG GCACATCGCT GCCGCACAAC
GCGGCCATTC CCGCGGTGGA TGCGCGGCGC TACGTGCTTG CGCATATGTC AGGTATCCGC
ATCGTCGATA TGGCGCTGCA GGGGCTGACG CTGTCCAAGA TCCTCACGCG CGCCGCGTTC
GAAAACGCCA TCCGTGTCAA CGCGGCCATT GGTGGCTCGA CCAACGCGGT GATCCACCTC
AAGGCGATTG CCGGGCGCAT TGGCGTGCCG CTTGAGCTGG AAGACTGGTC ACGCATCGGC
CGGGACACAC CGACCATCGT CGACCTGATG CCCTCGGGAC GCTTCCTGAT GGAGGAGTTC
TATTACGCCG GCGGCCTGCC CGCAGTGCTG CGCCGCCTCG GTGAAGCAGA CTTGCTGCCG
CACCCCGATG CGTTGACGGT CAACGGCAAG ACGCTGTGGG AGAACGTCAA GAGCGCGCCC
ATCACCGACG ATGAAGTCAT CCGCCCGCTC ACCAACCCGC TGATCGACGA TGGCGGCATT
CGGGTGCTGC GCGGCAACCT CGCGCCGCGC GGTGCGGTGC TCAAGCCATC GGCCGCCAGT
CCGGAATTGC TGCGGCATCG CGGCCGTGCG GTCGTGTTCG AAAACCTCGA ACACTACAAG
GAACGCATCG TCGATGAAGC GCTGGACGTG GATGCCAGCT CCGTGCTGGT GATGAAGAAC
TGCGGGCCGA AGGGCTACCC GGGCATGGCC GAGGTCGGAA ACATGGGCCT GCCGCCCAAG
CTGCTGCGCC AGGGCGTAAA GGATATGGTC CGCATTTCCG ACGCGCGCAT GAGCGGCACG
GCCTACGGAA CAGTCGTGCT GCACGTCGCG CCCGAAGCGG CGGCCGGCGG CCCGCTGGCC
GCGGTGCAGG ACGGCGACTG GATCGAACTC GACTGCGAAG CCGGCACGCT GCACCTGGAC
ATCGACGACG CCGAACTTGC GCGTCGCATG GCCGCCTATC AGGCGCCGCG CTCCCATGGT
GAAGGCGGTG GCTACCAGCG CCTGTACGTC AACCACGTAT TGCAGGCCGA CGAGGGCTGC
GACCTCGATT TCCTGGTCGG CTGCCGTGGC GCCGCCGTGC CGCGCCATTC GCACTGA
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| Protein sequence | MSESKPKLRS AQWFGTADKN GFMYRSWMKN QGIPDHEFDG RPIIGICNTW SELTPCNAHF
RKLAEHVKRG IYEAGGFPVE FPVFSNGESN LRPTAMLTRN LAAMDVEEAI RGNPIDAVVL
LTGCDKTTPA LLMGAASCDV PAIVVTGGPM LNGKLDGKNI GSGTAVWQLH ESLKAGEIDL
HHFLSAEAGM SRSAGTCNTM GTASTMACMA EALGTSLPHN AAIPAVDARR YVLAHMSGIR
IVDMALQGLT LSKILTRAAF ENAIRVNAAI GGSTNAVIHL KAIAGRIGVP LELEDWSRIG
RDTPTIVDLM PSGRFLMEEF YYAGGLPAVL RRLGEADLLP HPDALTVNGK TLWENVKSAP
ITDDEVIRPL TNPLIDDGGI RVLRGNLAPR GAVLKPSAAS PELLRHRGRA VVFENLEHYK
ERIVDEALDV DASSVLVMKN CGPKGYPGMA EVGNMGLPPK LLRQGVKDMV RISDARMSGT
AYGTVVLHVA PEAAAGGPLA AVQDGDWIEL DCEAGTLHLD IDDAELARRM AAYQAPRSHG
EGGGYQRLYV NHVLQADEGC DLDFLVGCRG AAVPRHSH
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