| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2978 |
|---|
| Symbol | |
|---|
| ID | 6287494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 3102998 |
|---|
| End bp | 3104416 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642626548 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001900533 |
|---|
| Protein GI | 187930046 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACTG CTTACTTCGC GCCATGCCCC CGTGGGCTGG AACAGGCGCT GGCCGATGAA
CTGGCCGAAA TCGCCATCCG CCCCGAGGTG GATGAGCTGG CCGCGTTCGA GGTGGGCCGC
ACCGTGCCGG GCGGCGTGCA CTTCTTCGGC ACGCAGGGCG CGGCGTATGC CGTCAACCTG
CACAGCCGCA TTGCCAGCCG TGTGCTGATG CGCCTGGGCT CGCGCGGGTA TCGCTCGGAA
GACGACATCT ACGCCTTGGC CGCTGCGCAG CGCTGGGAAG ACTATTTCAC GCCCGACGAA
ATGATCCGCG TGGACGTGAC CGCGCACAAA TCGCCGTTGC AGAGCCTGAA GTTTGTCGGC
CTGCGCGTCA AGGACGGGGT GTGTGACCGC TTCCGCCAGC GCATGGGCGC GCGCCCCAGC
GTCGATACGG TCTCCCCCGA CGTGCGCATC TACGCATACC TGACCGAGAC CGATTGCACG
ATCTACCTCG ACACCACCGG CGAGCCGCTC TTCAAGCGCG GCTGGCGCCA GGAAAAGGGC
GAGGCGCCGC TGAAGGAGAA CCTCGCGGCC GGCATCCTGC GCCTGACGGG CTGGACGGGT
GCCCACGGCA TGCCGTTCTA CGACCCGATG TGCGGCAGCG GCACGTTCCT CATCGAAGCT
GCGCAACGTG CTCTGGGCAT TGCACCGGGC GGGCAGCGCG CCTTCGCCTG CGAGTGGTTG
CAGGACCACG ACGCCAAATG CTTCAAGCGC CTGCGCGAAG CTGCCGCCGA TGCGGCCGCC
GCATCCATGC GCCGTGCGCC GCCGCTGGTG GCCGGCTCCG ACATTTCCAC CGACATGCTG
GCCTATGCCG CCGCCAACTG GCAGCGTGCC GGCCTGCCCG GCGAGCCGGC GCTCAAGCAA
GTCGATGCAC GCTTCGGCAA GCCGCCGTTC GAGGCAGCCG GCGTGTTGTT GATGAACCCG
CCCTACGGTG AGCGTATCGC CGTGCGCGGT GCACACGGTT CACGCCGCCG CCGACCGGAA
GGCGAGGGCG ACGAGGATGG CACCGTGTTC GAGCGCGCCA GCCGCGCCAT GGGTGCCCCG
CGCGACGATG GCCGCCGTCC GATGCGCGAG CTGCGGCAAC CTGAGCCGCC CCCCCCGGTT
GACCCCGAGG AAGAGGCCGC CGCCAACGAA TTCGCGCAGG CTTTTGCCGG CACGCTCAAG
CGTGAGTTCG CCGGCTGGAA GGCGTTCGTC TTCACCGGCG ATCTTTCGAT GCCGCGTCGG
ATGCGGCTGA AGGAATCGCA GCGCACGCCG CTCTACAACG GCAACATCGA ATGCCGCCTG
TTCCGCTTCG ACATGGTGAA GGGCGGCATG CGTGATCGAC CCGAACGGCC CGAGCGGCCC
GCAAAGGGCG ATGCCTCAAA CGACAACGCC GACGCATAG
|
|---|
| Protein sequence | MATAYFAPCP RGLEQALADE LAEIAIRPEV DELAAFEVGR TVPGGVHFFG TQGAAYAVNL
HSRIASRVLM RLGSRGYRSE DDIYALAAAQ RWEDYFTPDE MIRVDVTAHK SPLQSLKFVG
LRVKDGVCDR FRQRMGARPS VDTVSPDVRI YAYLTETDCT IYLDTTGEPL FKRGWRQEKG
EAPLKENLAA GILRLTGWTG AHGMPFYDPM CGSGTFLIEA AQRALGIAPG GQRAFACEWL
QDHDAKCFKR LREAAADAAA ASMRRAPPLV AGSDISTDML AYAAANWQRA GLPGEPALKQ
VDARFGKPPF EAAGVLLMNP PYGERIAVRG AHGSRRRRPE GEGDEDGTVF ERASRAMGAP
RDDGRRPMRE LRQPEPPPPV DPEEEAAANE FAQAFAGTLK REFAGWKAFV FTGDLSMPRR
MRLKESQRTP LYNGNIECRL FRFDMVKGGM RDRPERPERP AKGDASNDNA DA
|
|---|
| |