Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2975 |
Symbol | |
ID | 6287124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3099420 |
End bp | 3100748 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642626545 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001900530 |
Protein GI | 187930043 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCCTA TTACACATCG CGGATACCAG GCCGAGCTCA AGCAGTTCCG GCTCGTCTTC AGCCGCATGG CCGCCATTAC CGGCATCGTG CTGGTGCTGG CCGGTGTCGG GCTGGACTAC GGCATGTATG TGGACAAGCT GTGGCTGTTC GCTTCGCTGC GCGTCATCAC GTCGCTCATC ATGCTAGGCG CACTGCTGGT GCTGTACACG CGCTGGGGCG AGGAGCACGT GCAGAGCCTG ACGTTCTTCT GGCTGATCTG TCCGCAGATC ATGATCTCGT GGATGATCTA CGACACCGAG GGCGCCAGTT CACCGTATTA CTCGGGGCTG AACCTGGCGA TCTATGCAGT GGGCATGGTG ATGCCGATCG GCTTTCTGCA GGCCGTACTG TTCGGCACCT GCACGTACAT CTTCTGGGTG ATCGCGTGCA CGCTGCATCC GGGCGGCATC CAGTCGCGCG AGATCTTCAT CGTGCATTCG ATGTTCATCC TGTTCTCGAT TGCGACGAGT ACGCTGTACA CGTACTTCAA CGAGCGCGGG CGCTTCCAGC TCTTCCGGCT CAAGGAAGAA GTGGCGCAGA AGAACGAGCA GCTGGCGCAG ACCAATCAGA ACCTCACCGA CATCAAGGGC CAGCTTCTGC AGCAGGAAAA GATGGCCGCC ATCGGCACGC TGTCCGCCGG CCTGCTGCAT GAGATCAACA ACCCGGTCAA CTTTTGCCTG ATGGCGATTG CCGTGGCGCA GGAAGATCCG ACCGCCAAGA GCAGCCCGAT GCTGCTCGAA TGCCTGACCG ATGCCAAGGA AGGCATGCAG CGCGTGCAGC ACATCGTGTC GGACCTGAAG ACCTTCGCCT ACCGCAGCCC CGAGAAAGGC GAAGCCGATG CACCGTTCCT GGTCGAGAAG GCTATCGACT CGGCCGTCCG CCTGACGAGC CACGAGTTGC GCGGCGTGGC CCTGGAACGC AAGCTGCCGG CTGACACGCT CGTGCGCGGC GACGAGGCGG CCATCATCGG CGTGCTGATC AACCTGTTGT CGAACGCGGC GCTTGCCATG CAAAAGGTGC AGCGCGAGAA CCCGCGCATC GAAATTGCCG GTGAGTGGAT CGACAACCGC CTCCATGTGG TGGTGACCGA CAATGGCCCG GGGATCTCGG AAAAGAACCT GTCGCGCGTG TTCGAGCCGT TTTTCACCAC GCGCGATGTC GGCAAGGGCC TGGGCCTGGG CCTGTCGATC AGCTACAGCG TGATCCAGCG CCACGGCGGC ACCCTTGCGG TGACGAGCCA GGAAGGCGAG TGGGCGCGCT TCACGTTCGA TCTGCCGCGC TCGGAGTAG
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Protein sequence | MEPITHRGYQ AELKQFRLVF SRMAAITGIV LVLAGVGLDY GMYVDKLWLF ASLRVITSLI MLGALLVLYT RWGEEHVQSL TFFWLICPQI MISWMIYDTE GASSPYYSGL NLAIYAVGMV MPIGFLQAVL FGTCTYIFWV IACTLHPGGI QSREIFIVHS MFILFSIATS TLYTYFNERG RFQLFRLKEE VAQKNEQLAQ TNQNLTDIKG QLLQQEKMAA IGTLSAGLLH EINNPVNFCL MAIAVAQEDP TAKSSPMLLE CLTDAKEGMQ RVQHIVSDLK TFAYRSPEKG EADAPFLVEK AIDSAVRLTS HELRGVALER KLPADTLVRG DEAAIIGVLI NLLSNAALAM QKVQRENPRI EIAGEWIDNR LHVVVTDNGP GISEKNLSRV FEPFFTTRDV GKGLGLGLSI SYSVIQRHGG TLAVTSQEGE WARFTFDLPR SE
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