Gene Rpic_2975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2975 
Symbol 
ID6287124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp3099420 
End bp3100748 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID642626545 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001900530 
Protein GI187930043 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCTA TTACACATCG CGGATACCAG GCCGAGCTCA AGCAGTTCCG GCTCGTCTTC 
AGCCGCATGG CCGCCATTAC CGGCATCGTG CTGGTGCTGG CCGGTGTCGG GCTGGACTAC
GGCATGTATG TGGACAAGCT GTGGCTGTTC GCTTCGCTGC GCGTCATCAC GTCGCTCATC
ATGCTAGGCG CACTGCTGGT GCTGTACACG CGCTGGGGCG AGGAGCACGT GCAGAGCCTG
ACGTTCTTCT GGCTGATCTG TCCGCAGATC ATGATCTCGT GGATGATCTA CGACACCGAG
GGCGCCAGTT CACCGTATTA CTCGGGGCTG AACCTGGCGA TCTATGCAGT GGGCATGGTG
ATGCCGATCG GCTTTCTGCA GGCCGTACTG TTCGGCACCT GCACGTACAT CTTCTGGGTG
ATCGCGTGCA CGCTGCATCC GGGCGGCATC CAGTCGCGCG AGATCTTCAT CGTGCATTCG
ATGTTCATCC TGTTCTCGAT TGCGACGAGT ACGCTGTACA CGTACTTCAA CGAGCGCGGG
CGCTTCCAGC TCTTCCGGCT CAAGGAAGAA GTGGCGCAGA AGAACGAGCA GCTGGCGCAG
ACCAATCAGA ACCTCACCGA CATCAAGGGC CAGCTTCTGC AGCAGGAAAA GATGGCCGCC
ATCGGCACGC TGTCCGCCGG CCTGCTGCAT GAGATCAACA ACCCGGTCAA CTTTTGCCTG
ATGGCGATTG CCGTGGCGCA GGAAGATCCG ACCGCCAAGA GCAGCCCGAT GCTGCTCGAA
TGCCTGACCG ATGCCAAGGA AGGCATGCAG CGCGTGCAGC ACATCGTGTC GGACCTGAAG
ACCTTCGCCT ACCGCAGCCC CGAGAAAGGC GAAGCCGATG CACCGTTCCT GGTCGAGAAG
GCTATCGACT CGGCCGTCCG CCTGACGAGC CACGAGTTGC GCGGCGTGGC CCTGGAACGC
AAGCTGCCGG CTGACACGCT CGTGCGCGGC GACGAGGCGG CCATCATCGG CGTGCTGATC
AACCTGTTGT CGAACGCGGC GCTTGCCATG CAAAAGGTGC AGCGCGAGAA CCCGCGCATC
GAAATTGCCG GTGAGTGGAT CGACAACCGC CTCCATGTGG TGGTGACCGA CAATGGCCCG
GGGATCTCGG AAAAGAACCT GTCGCGCGTG TTCGAGCCGT TTTTCACCAC GCGCGATGTC
GGCAAGGGCC TGGGCCTGGG CCTGTCGATC AGCTACAGCG TGATCCAGCG CCACGGCGGC
ACCCTTGCGG TGACGAGCCA GGAAGGCGAG TGGGCGCGCT TCACGTTCGA TCTGCCGCGC
TCGGAGTAG
 
Protein sequence
MEPITHRGYQ AELKQFRLVF SRMAAITGIV LVLAGVGLDY GMYVDKLWLF ASLRVITSLI 
MLGALLVLYT RWGEEHVQSL TFFWLICPQI MISWMIYDTE GASSPYYSGL NLAIYAVGMV
MPIGFLQAVL FGTCTYIFWV IACTLHPGGI QSREIFIVHS MFILFSIATS TLYTYFNERG
RFQLFRLKEE VAQKNEQLAQ TNQNLTDIKG QLLQQEKMAA IGTLSAGLLH EINNPVNFCL
MAIAVAQEDP TAKSSPMLLE CLTDAKEGMQ RVQHIVSDLK TFAYRSPEKG EADAPFLVEK
AIDSAVRLTS HELRGVALER KLPADTLVRG DEAAIIGVLI NLLSNAALAM QKVQRENPRI
EIAGEWIDNR LHVVVTDNGP GISEKNLSRV FEPFFTTRDV GKGLGLGLSI SYSVIQRHGG
TLAVTSQEGE WARFTFDLPR SE