Gene Rpic_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2878 
Symbol 
ID6287774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2982246 
End bp2983481 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content69% 
IMG OID642626448 
Productimidazolonepropionase 
Protein accessionYP_001900433 
Protein GI187929946 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC CGGCCAACCC GCACTGGGAC GGGCTCTGGA CCAACGTCCA TCTCGCCACG 
CTCGCCGCCG ATGCCGACGG CTACGGCGAG ATCCGCGACG GCGCCATCGC CGTCAAGGAC
GGCCGCATTG CGTGGCTTGG GTACCGCGCT GATGTGCCCG TCAACGCCCG CGCCACACGC
GAACACGATG GCGGCGGCGC GTGGCTCACG CCCGGCCTGA TCGACTGCCA CACACACCTC
GTCTACGCCG GCAACCGCAG CAATGAATTC GAAGCGCGCC TGAACGGCGT GCCATACGAA
GAGATCGCGC GCGCGGGCGG CGGCATCCTC TCGACCGTTC GCGCCACGCG GGCGGCCAGC
GAGGACGCGC TGGCCGAAGC CAGTCTGCCT CGCCTGAATG CCCTGAGCGC CGAAGGTGTC
ACGACCGTCG AAATCAAGTC GGGCTACGGC CTGAACCTCG AAACCGAGCG CCGCATGCTG
CGGGTGGCGC GCCGCTTCGG CCAGGCATTG CCAGTGCGCG TGCGGACCAC GTTCCTCGGC
GCGCATGCCG TACCGCCCGA ATTTGCCGGC CGCGCGGATG ACTACATCGA TCATCTGTGC
GCCGATGTGC TGCCCGCGCT TGCCGGAGAA GGTCTTGTCG ATGCGGTTGA CGCCTTCTGC
GAAACCATTG GTTTTACGCC CGCACAGACA GTGCGCATGT TCGACGCTGC CCAGCGCCAC
GGCCTGCCGG TCAAGCTGCA TGCCGAACAG CTCTCCGACC AGGGCGGCGC GGCGCTGGTG
GCTCGCTACG GCGGTCTTTC AGCGGATCAT CTCGAATGCC TGACCGATGC AGGCGTTGCC
GCCATGGCGC AAGCCGGCAC GGTCGCCGTG CTGCTGCCCG GCGCGTTCTA CTGCCTGCGC
GAAACGCGCC TGCCGCCGAT GGCCGCGCTG CGTGCCGCCA GTGTGCCCAT GGCCGTGTCG
ACCGACTGCA ACCCTGGCAC ATCGCCGTTG TCGTCGCTGC TGCTGGCGAT GAACATGGCG
TGCACGCTGT TCCGCATGAC GCCGCTGGAA GCGCTGACCG GCGCCACGCG TCATGCTGCC
GCCGCGCTGG GCCTGTCTGG CACGTGTGGC GTGCTGGCTC CGGGCTGCGC GGCCGATTTC
GCTCTGTGGC GCATCGACCG GCCCGCCGAT CTGGCGTACG CGATGGGGCT TAACCCGTGT
GTTGGTGTGG TCAAGGACGG CGCCGTGGTG GCGTAA
 
Protein sequence
MADPANPHWD GLWTNVHLAT LAADADGYGE IRDGAIAVKD GRIAWLGYRA DVPVNARATR 
EHDGGGAWLT PGLIDCHTHL VYAGNRSNEF EARLNGVPYE EIARAGGGIL STVRATRAAS
EDALAEASLP RLNALSAEGV TTVEIKSGYG LNLETERRML RVARRFGQAL PVRVRTTFLG
AHAVPPEFAG RADDYIDHLC ADVLPALAGE GLVDAVDAFC ETIGFTPAQT VRMFDAAQRH
GLPVKLHAEQ LSDQGGAALV ARYGGLSADH LECLTDAGVA AMAQAGTVAV LLPGAFYCLR
ETRLPPMAAL RAASVPMAVS TDCNPGTSPL SSLLLAMNMA CTLFRMTPLE ALTGATRHAA
AALGLSGTCG VLAPGCAADF ALWRIDRPAD LAYAMGLNPC VGVVKDGAVV A