Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2806 |
Symbol | |
ID | 6288419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2916229 |
End bp | 2916657 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626377 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_001900362 |
Protein GI | 187929875 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0047121 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTCC GCCCGCGCCG TGCCCGCGAA GAGCCGGAGA TCAACCTGAT CCCGCTGATC GACGTATTGC TCGTGATCCT CATCTTCCTG ATGATCACGA CCACGTATTC CCGTTACACA GAACTGAAGG TCAACCTGCC GACCGCCGAG GCTGAAAAGG CCACCGAGCG CCCGGGTCAG ATCGTCGTGT CCGTCACCGC CAACGGCGTC TACTCCGTCG ACAAGCAAGT GCTCGACACC CGCGATGTCA CCAGCCTGGC CGATGCCCTG CGCAATGCCG CAGGTAAGGC CGGCGGCTCC GAGCCCATCG TCATCGTCAA CGCCGATGCG CAGGCCGCAC ATCAGGCGGT GGTCAATGTG ATGGAAGCGG CGCGGGTGGC CGGTCTCTCG CATCTGACCT TCGCCACGCA AACCGGCAAC GCCCGCTAA
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Protein sequence | MRFRPRRARE EPEINLIPLI DVLLVILIFL MITTTYSRYT ELKVNLPTAE AEKATERPGQ IVVSVTANGV YSVDKQVLDT RDVTSLADAL RNAAGKAGGS EPIVIVNADA QAAHQAVVNV MEAARVAGLS HLTFATQTGN AR
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