Gene Rpic_2792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2792 
Symbol 
ID6287416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2903553 
End bp2904305 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content68% 
IMG OID642626363 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001900348 
Protein GI187929861 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGTG CGCAAATGCC TGTCGGACAA GGCTTCGCGG CGGGCGGCGA AGCGCCGGAG 
CAACCGCGCG GACCGTCCGT TCTGGTGGCC GGCGCCAACG GGCTGGTGGG CCGCGCGGTG
GTGCATCGGC TCGTTGCGCA GCCGTGGGCG GGCGGCGTGA CCGCGCTTGT ACGGCGGCGC
GGGGCCTTGA CAGCAGGGCA GGCGGCGCCC GGTCGATTGC GCGAATGCGT GGTCGATTTC
GATCGCCTCG ATGCGCCCGA AACCCAGTCT GCGTTTGCCG CCGATATCGT TATCTGCGCG
CTTGGCACGA CGATCCGGCA GGCCGGTTCC CAGGCGGCAT TCCGGCGCGT TGATGTCGCG
TATCCGGCTG AACTGGCGCG GCGCGCGTTT GCCGCTGGCG CGCATCATTT TCTGCTGGTG
AGTGCGTTGG GCGCCGATGC GCGCTCGCGG GTTTTCTACA ACCGCTGCAA GGGTGAGGTG
GAGGCCGAAA TCTTGTCGAT CGGCTTTCCG TCGGTGACGG TTGTCCGGCC TTCGCTGCTG
CTCGGCGCGC GCGCAGAATT TCGGCTGGGT GAACGCATTG CGCAAGGCCT GTCGTGCGCA
ATCGGATGGA TGGTGCCCAA GACGTGGCGG CCGGTGCCGG CGGAATCGGT TGCGGCGGCG
CTCGTCATGG CGGCGCGGGT GGATGCGCCC GGTGTGCGTG TGCTGGAGAA CGCGGCGTTG
CTTGCCGCAA AAGACGAACG GCCGGTGGGA TGA
 
Protein sequence
MSSAQMPVGQ GFAAGGEAPE QPRGPSVLVA GANGLVGRAV VHRLVAQPWA GGVTALVRRR 
GALTAGQAAP GRLRECVVDF DRLDAPETQS AFAADIVICA LGTTIRQAGS QAAFRRVDVA
YPAELARRAF AAGAHHFLLV SALGADARSR VFYNRCKGEV EAEILSIGFP SVTVVRPSLL
LGARAEFRLG ERIAQGLSCA IGWMVPKTWR PVPAESVAAA LVMAARVDAP GVRVLENAAL
LAAKDERPVG