| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2759 |
|---|
| Symbol | |
|---|
| ID | 6288123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 2870980 |
|---|
| End bp | 2871447 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642626330 |
|---|
| Product | conserved hypothetical signal peptide protein |
|---|
| Protein accession | YP_001900315 |
|---|
| Protein GI | 187929828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3895] Predicted periplasmic protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.30249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGTT TCGCAACTGC AGTGATGTTC GGGCTGGCGC TGGGCGCCGG CGTCTTCAGC
GGCGTCGCCA CCGCCCAGCA ATCGCCGGTG CCCGGCATGT CGTCCGACGA TCTGAATACC
GCGCTCGACT TTGCCAAGGC GGGGCTCAAC AAGGCGATCG ATCAGGCGCG CGCCTATTCC
GCGTTGCCGA TCAAGGACCC GCACGACGTG CGCTACACGT GCGAAGGCGG CAAGACGCTG
CTTGTGAAAT ACATGACCGT GGGGGATACG CCGCTGGCCG CCATGACCCT CAACGGCAAG
ACGCTCGTGT TTGCCAACGT GATGGCCGCG TCGGGTGCGC GCTATGCGTC GGGCCAGTAT
GTCTGGTGGA CGAAGGGCCC CACCGGTTTC CTCGCCGACG AGACCCTGTC CGGCAGCCGC
AACCAGCTTT ACCGCGATTG CAGCGAAGCG AGCAGCGGCC GTCCTTAA
|
|---|
| Protein sequence | MRRFATAVMF GLALGAGVFS GVATAQQSPV PGMSSDDLNT ALDFAKAGLN KAIDQARAYS
ALPIKDPHDV RYTCEGGKTL LVKYMTVGDT PLAAMTLNGK TLVFANVMAA SGARYASGQY
VWWTKGPTGF LADETLSGSR NQLYRDCSEA SSGRP
|
|---|
| |