| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2730 |
|---|
| Symbol | |
|---|
| ID | 6289606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 2845658 |
|---|
| End bp | 2846863 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642626302 |
|---|
| Product | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase |
|---|
| Protein accession | YP_001900287 |
|---|
| Protein GI | 187929800 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
|---|
| TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00984234 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.557925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC AAGGCAAACA TTTCGTGCTC GGCCTGACCG GGGGCATCGC GTGCTACAAG
TCGGCCGAGC TGGTGCGGCT CTTGACCAAG GCGGGCGCCA CCGTGCAGGT GGTGATGACC
GAGGCCGCCA CGCACTTCAT CACGCCGGTG ACGATGCAGG CGCTTTCCGG TCGCCCGGTC
TTCACGTCGC AGTGGGATGG CCGCATCGGC AACAACATGC CGCACATCGA CCTCTCGCGC
GAGGCAGATG CCATCGTCAT TGCGCCTGCC TCCACGGACT TTCTCGCCAA GCTCGCGCAC
GGCATGGCCG ACGATCTGCT CTCAACGCTG TGCATCGCGC GCGATTGCCC GCTGCTCGTG
GCGCCCGCGA TGAACCGCCA GATGTGGGCC GCGCCCGCCA CGCAACGCAA TGCCGCCCAA
CTGCGCGCCG ACGACGTCAC CCTGCTCGGC CCCGATGCCG GCGACCAGGC CTGCGGCGAA
GTCGGCGACG GCCGCATGCT CGAGCCGGAA GACATCGTCC AGCAACTCAT TGGCTTCTTC
CAGCCCAAGC TGCTGCGAGG ACACCGGGTG CTGCTGACAG CCGGCCCGAC CTTCGAGCCA
ATCGACCCGG TGCGCGGCAT CACGAACCTG TCCAGCGGCA AGATGGGTTT TGCGCTGGCG
CGGGCGGCAT CGCAGGCCGG TGCGGAGGTC ACGCTCGTTG CCGGTCCGTG CCATCAGGAC
ACCCCTGCAG GCGTATTGCG CATCGATGTG CAAACCGCCC AGCAGATGCA CGACGCCGTC
ATGCACGAAC TGGATACGGC AAAGAACGAC ATCTTCATTG CCGTCGCCGC TGTGGCCGAT
TGGCGTGTGG CACAGGCGGC AGAGCACAAG CTGAAGAAGC AGAGCGACGC CGACGTGCCC
TCTCTAACGT TCACGCAGAA CCCCGACATC CTGGCGGCTG TCGCACGCCG CCCGAATGCG
CCGTTCTGCG TCGGTTTTGC GGCCGAAACG GAGCGGCTGG AGGAGTTTGG CGAGGCCAAG
CGTCAGAAGA AGGGCATCCC GTTGCTGGTC GGCAATCTCG GCCATCAGAC TTTCGGCCGC
GACGACAACG AAGTGGCGCT CTTCGATGCA AAGGGGATCA CGCGCCTGCC GCGTGCCGAC
AAGCTGACGC TCGCGCGCCA GATCGTCGCG GCCATCGCCG ATCGCGTGCA TGGGGCTCAG
TCATGA
|
|---|
| Protein sequence | MELQGKHFVL GLTGGIACYK SAELVRLLTK AGATVQVVMT EAATHFITPV TMQALSGRPV
FTSQWDGRIG NNMPHIDLSR EADAIVIAPA STDFLAKLAH GMADDLLSTL CIARDCPLLV
APAMNRQMWA APATQRNAAQ LRADDVTLLG PDAGDQACGE VGDGRMLEPE DIVQQLIGFF
QPKLLRGHRV LLTAGPTFEP IDPVRGITNL SSGKMGFALA RAASQAGAEV TLVAGPCHQD
TPAGVLRIDV QTAQQMHDAV MHELDTAKND IFIAVAAVAD WRVAQAAEHK LKKQSDADVP
SLTFTQNPDI LAAVARRPNA PFCVGFAAET ERLEEFGEAK RQKKGIPLLV GNLGHQTFGR
DDNEVALFDA KGITRLPRAD KLTLARQIVA AIADRVHGAQ S
|
|---|
| |