Gene Rpic_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2727 
SymbollspA 
ID6288808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2844017 
End bp2844541 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID642626299 
Productlipoprotein signal peptidase 
Protein accessionYP_001900284 
Protein GI187929797 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.149763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC GGAACAACGG CAAGAGCAAA TCGATCGGGT TGAAGAAGAG CAGCGGCGGT 
CATGGCGTGG GCCCCTGGCT GGGTCTGGCC GTCATCTGGA TCCTGCTGGA CCAGTTGACC
AAGATCGCCG TCCTCAAAAC CTTCACTTAC GGCGAGTCGC GCCCGGTCAC CGGGTTCTTC
AACCTGGTGC TCGCCTATAA CAGGGGAGCG GCGTTTTCGT TCCTGGCGGC GGCAGGCGGC
TGGCAGCGCT GGTTCTTCAC GGGCCTGGGC GTGGCGGCGG CGCTGTTCAT CGTGTGGCTG
CTCAAGCGGC ACAGCGGGCA GAAGATGTTC TGCTTCGCGC TGGCGCTGAT TCTGGGCGGC
GCGCTGGGCA ACGTGATCGA CCGCGTCATC TACGGTCACG TGGTGGACTT CCTCGACTTC
TACCTGCACA ACTACCACTG GCCGGCCTTC AACGTGGCGG ACTGCGGCAT CACCATCGGC
GCGGTGCTGC TGATCGTCGA CGAACTGCGA CGCGTGCGTC GCTGA
 
Protein sequence
MATRNNGKSK SIGLKKSSGG HGVGPWLGLA VIWILLDQLT KIAVLKTFTY GESRPVTGFF 
NLVLAYNRGA AFSFLAAAGG WQRWFFTGLG VAAALFIVWL LKRHSGQKMF CFALALILGG
ALGNVIDRVI YGHVVDFLDF YLHNYHWPAF NVADCGITIG AVLLIVDELR RVRR