Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2727 |
Symbol | lspA |
ID | 6288808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2844017 |
End bp | 2844541 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642626299 |
Product | lipoprotein signal peptidase |
Protein accession | YP_001900284 |
Protein GI | 187929797 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.149763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTC GGAACAACGG CAAGAGCAAA TCGATCGGGT TGAAGAAGAG CAGCGGCGGT CATGGCGTGG GCCCCTGGCT GGGTCTGGCC GTCATCTGGA TCCTGCTGGA CCAGTTGACC AAGATCGCCG TCCTCAAAAC CTTCACTTAC GGCGAGTCGC GCCCGGTCAC CGGGTTCTTC AACCTGGTGC TCGCCTATAA CAGGGGAGCG GCGTTTTCGT TCCTGGCGGC GGCAGGCGGC TGGCAGCGCT GGTTCTTCAC GGGCCTGGGC GTGGCGGCGG CGCTGTTCAT CGTGTGGCTG CTCAAGCGGC ACAGCGGGCA GAAGATGTTC TGCTTCGCGC TGGCGCTGAT TCTGGGCGGC GCGCTGGGCA ACGTGATCGA CCGCGTCATC TACGGTCACG TGGTGGACTT CCTCGACTTC TACCTGCACA ACTACCACTG GCCGGCCTTC AACGTGGCGG ACTGCGGCAT CACCATCGGC GCGGTGCTGC TGATCGTCGA CGAACTGCGA CGCGTGCGTC GCTGA
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Protein sequence | MATRNNGKSK SIGLKKSSGG HGVGPWLGLA VIWILLDQLT KIAVLKTFTY GESRPVTGFF NLVLAYNRGA AFSFLAAAGG WQRWFFTGLG VAAALFIVWL LKRHSGQKMF CFALALILGG ALGNVIDRVI YGHVVDFLDF YLHNYHWPAF NVADCGITIG AVLLIVDELR RVRR
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