| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2650 |
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| Symbol | |
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| ID | 6288810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2764454 |
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| End bp | 2765806 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642626221 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_001900208 |
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| Protein GI | 187929721 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.229686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.77675 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG TTTCGGTCAT CGACCGCTTC CTCGACGTTT TCTCGCGCTA CATCGACTCG
GGATTCGGCC TGGTGCAGGG CGAGGTGGCG TTCCTGACCG CAACGTTGAT CGTCATCGAC
ATGACGTTGG CCGGGCTGTT CTGGGCGATG GGGCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGATCCGCAA GGTGCTATAC GTGGGTGCTT TCGCCTACAT CATCGGCAAC
TTCAACACCC TGGCGGGCAT CCTGTTCCGT TCCTTCGCCG GGCTGGGCCT GACGGCCAGC
GGCTCGACCT TGAGCATGGG CAACTTCCTG CAGCCGGGAC GGCTGGCCAA GGCCGGCATC
GACGCGGCGG CGCCCATCCT CGACCAGATC CGGGAGATGG CGGGCTTCCC CGAGGTGTTC
ATCAATATCG CGCCCATCGT CGTGCTGTTC CTCGCGTGGC TGGTGGTCAT CGTCAGCTTC
TTCGTGCTGG CGGTGCAGCT CTTCGTCACG CTGATCGAGT TCAAGCTGAC CACGCTCGCG
GGCTTCGTGC TCGTGCCGTT CGCCCTCTGG AACAAGACGG CGTTCCTAGT CGAGAAGGTG
TTGGGCAATG TGGTGTCGTC CGGCATCAAG GTGCTGGTGC TGGCGGTGAT CGTGGGCATT
GGTTCGGGGC TGTTCGCGGA GTTTCAGGTA CAGCCCGCCG AGCCATCCAT CGACCACTCC
GTGGTCGTGA TGCTGGCCTC GCTGACGCTG CTGGCCTTGG GCATTTTCGG GCCGGGCATT
GCGACCGGGC TGGTGTCCGG CGGGCCGCAA CTCGGCGCGG GTGCGATGGC CGGTGCGGCG
CTGGGCGCGG CCGGCGCTGC CGTTGCCGTG GGCGCTGCGG CCACGGGCGT CGGCGGCGCA
GTCGCCGCCG GGGCGCGCAT GGCGCCCGCA GCCGCCAAGC TGGCCGGTAG CGGAGCGCGT
GCCGCCACCG GAGCCGCGAG CAGCGCCCGG TCAGCGTTTC AGGCAGGTTC TGCATCCGCC
GGCGGTGGCC TCAAGGGCGC TGCCGCCGGC GTGGGCAATG TCGCCAAGAC CGGCGCGCAG
GCGGCCGGGC AGAAGGTGGC CTATGGCGCG CGTTCGATGA AGGAGCGCAT GGCGGCGGCC
TTTCGACCCG ACGACGCCGG ATCGGCGTCT GGGGCCGGTG CCGCCCAGGC GGCAAACGAG
CCAACCCCAT CCACCGAACA ACCCGCCTGG GCCAAGCGCC TGCACCGCAG GCAGCAACTC
ACCCATGCCG CTACGACCGC CGCCCACACG CTGCGCGGCG GCGATGGCGG CAGCTCCAGC
CAGGGGCCAA GCCTGCGCGA TTCCGAATCC TGA
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| Protein sequence | MNDVSVIDRF LDVFSRYIDS GFGLVQGEVA FLTATLIVID MTLAGLFWAM GHATGQGEDV
IAKLIRKVLY VGAFAYIIGN FNTLAGILFR SFAGLGLTAS GSTLSMGNFL QPGRLAKAGI
DAAAPILDQI REMAGFPEVF INIAPIVVLF LAWLVVIVSF FVLAVQLFVT LIEFKLTTLA
GFVLVPFALW NKTAFLVEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV QPAEPSIDHS
VVVMLASLTL LALGIFGPGI ATGLVSGGPQ LGAGAMAGAA LGAAGAAVAV GAAATGVGGA
VAAGARMAPA AAKLAGSGAR AATGAASSAR SAFQAGSASA GGGLKGAAAG VGNVAKTGAQ
AAGQKVAYGA RSMKERMAAA FRPDDAGSAS GAGAAQAANE PTPSTEQPAW AKRLHRRQQL
THAATTAAHT LRGGDGGSSS QGPSLRDSES
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