Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2601 |
Symbol | |
ID | 6289867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2715382 |
End bp | 2716581 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642626173 |
Product | integrase family protein |
Protein accession | YP_001900160 |
Protein GI | 187929673 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.533125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCAAAAC TCAAGCTCAC CAAGTCCGCA GTCGATGCGG CACAACCCCA GGCGCAGGCC GTCGAACTCC GGGACACGCT GGTGCCCGGC TTCCTGTGCA AGGTTACACC AGCGGGCCGC AAGGTGTTCA TGCTCCAGTA CCGCACGAAC GCTGGCGAGC GGCGCAAGCC CGCCCTGGGC CTGTACGGGG AACTGACCGT CGAGCAGGCC CGCTCGCTGG CCCAGGAATG GCTGGCCGAG GTGCGCCGGG GCGGCGACCC CAGCGCGGCC AAGGCCGCCG CCCGTTCAGC CCCCACGGTC AAGGAGCTGT GTACCAAGTT CATGGAGGAT TACTCCAAGC AGCGCAACAA GCCCAGCACC CAGCGCGGGT ATCAGGCCGT CATCGACCGC TGCATCGTTC CGATGCTGGG CCGTTTGAAG GTCCAGGACG TGAAGCGCCC GGACGTGGCC ACGGCGATGA AGAAGATGGC GCACAAGCCG GCCGAGGCCA ACCGTGCTTT CAGCGTGATG CGCAAGATGT TCAACCTGGC CGAGGTGTGG GGCCACCGGC CTGACGGCAC CAACCCCTGC CGCCACGTCC CGATGTACCC CAACGGCAAG GCCACCCACC TCATCAGCGA CGAGGACATG GGCAAGCTGT TTCGGCGACT GGAGCACATC GAAGCCGAGG GTCTGGAGAA CTACGTCATC CCGCTGGCGA TCCGCCTTCA ATTCGAGTTC GCCGGCCGCC GCTCCGAAAT CGTGACGCTC CGATGGGATT GGGTGGACCT GGACAACCGC CGCGTGGTCT GGCCGGACAG CAAGACGGGC GGCATGTCCA AGCCCATGAG CGAGGAAGCC TATCGACTGC TCTCGACGGC GCCACGGCAG GAAGGCACTC CCTATGTGCT GCCGTCTCCA AGCCATCCCG GCAAGCACCT GACCACGGGC GAGTATTACG GCGGCTGGAG CCGCGCCCTC AAGGCGGCGG GCGCCACGCA CGTCGGCACG CATGGCATCC GCCACCGCTC CGCGACCGAC ATTGCCAACT CGGGCATCCC GGTCAAGGTC GGCATGGCGC TGACGGCGCA CAAGACCGTG GCGATGTTCA TGCGCTACGT CCACACCGAG GACGATCCGG TGCGCAAGGC GGCCGAGCTG GTGGCGAACC GGCGCAAGAC GATCACCGAG GCGCAGCGGC CTGCGGAGGT GGCTGCATGA
|
Protein sequence | MAKLKLTKSA VDAAQPQAQA VELRDTLVPG FLCKVTPAGR KVFMLQYRTN AGERRKPALG LYGELTVEQA RSLAQEWLAE VRRGGDPSAA KAAARSAPTV KELCTKFMED YSKQRNKPST QRGYQAVIDR CIVPMLGRLK VQDVKRPDVA TAMKKMAHKP AEANRAFSVM RKMFNLAEVW GHRPDGTNPC RHVPMYPNGK ATHLISDEDM GKLFRRLEHI EAEGLENYVI PLAIRLQFEF AGRRSEIVTL RWDWVDLDNR RVVWPDSKTG GMSKPMSEEA YRLLSTAPRQ EGTPYVLPSP SHPGKHLTTG EYYGGWSRAL KAAGATHVGT HGIRHRSATD IANSGIPVKV GMALTAHKTV AMFMRYVHTE DDPVRKAAEL VANRRKTITE AQRPAEVAA
|
| |