Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2553 |
Symbol | |
ID | 6289385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2659436 |
End bp | 2660344 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642626126 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001900113 |
Protein GI | 187929626 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.36259 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAAGC GTTCATGCGG GGATTGTCGC AGAATCCGCC CGCCGGCCGG TTCCCACGGC AACGTCAGGC AGCGCGTGCG TCCAACGCCG GCTCCTCTGC GACCGGGCTG CTCCGGCCAA TCCACCATCA GCACGCAGCT GTCCACGCTC GAAACCCGCC TGGGCTACCG CCTATGCGAA CGCGGCCGCA GCGGCTTCCG GCTCACCGCG CGCGGCGAAC GCTTCGTCGA TTCCGCACGC AAGCTGCTGG GCGCGCTCGA TGTCTTCAGC GCAGAGGCCC GCAAGGTGGG GCGTACTCTG GTCGGCACGT TGAATCTCGG ATTGATCGGT CATGCGCCCA TCAACGCGAA TGCGCGCATC AGTCAGGCCA TCGAGCGCTT TCGGGAGCGC GATGAATCCG TGCATTTCAT GGTCTCGGTG CGCCCGCCCG GGGAGCTGGA AGGACTGCTG CTCGACAACA AGATCCACAT GGCGATCGGC TATTTCTGGC ACCGTGTGCC GGCGCTGGAC TACACGACGA TCTTCCACGA GACGCAGCTT GCGTATGCGG GACGCGGCCA TCCGCTGTTC CGCAAGGCTG GGGACGTGAC GCCCGCGCAG GCGCTGGCGC ACGCATGGGC GTGGCGCAGC TATCCGCTGC CCGAAGCGGC GGGGTCGCCG GCCGAGCGGC CGGTGACTGC GGTGGCAGAC AACATGGAAG CGGTGGCAAT GCTGGTGCTT TCGGGCCGGC ACCTGGGTTA CCTGCCGGAG CACTTTGCGG CGCCCTATGT GGCCCAGGGC CTGTTGACGC CGTTGGCACC GGCAGCCATG CGCTACGAGG TGCCGTTCGA CATGGCGGTG CGCCGCGACG CCCGGCGCAA TGATCTGCTG GCCGCCTTCA TCGCTGACAT GAAAGCGGCC CACGCCTGA
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Protein sequence | MRKRSCGDCR RIRPPAGSHG NVRQRVRPTP APLRPGCSGQ STISTQLSTL ETRLGYRLCE RGRSGFRLTA RGERFVDSAR KLLGALDVFS AEARKVGRTL VGTLNLGLIG HAPINANARI SQAIERFRER DESVHFMVSV RPPGELEGLL LDNKIHMAIG YFWHRVPALD YTTIFHETQL AYAGRGHPLF RKAGDVTPAQ ALAHAWAWRS YPLPEAAGSP AERPVTAVAD NMEAVAMLVL SGRHLGYLPE HFAAPYVAQG LLTPLAPAAM RYEVPFDMAV RRDARRNDLL AAFIADMKAA HA
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