Gene Rpic_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2513 
Symbol 
ID6288321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2626229 
End bp2626936 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID642626087 
Productsuccinate dehydrogenase and fumarate reductase iron-sulfur protein 
Protein accessionYP_001900075 
Protein GI187929588 
COG category[C] Energy production and conversion 
COG ID[COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit 
TIGRFAM ID[TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.60219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CACGCGTTTT TGAGGTCTAC CGCTACGATC CCGATTCAGA TGTCCAGCCC 
TACATGCAGG CCTTTAACGT CGAGTTGAAG CCAGACGACC GGATGCTGCT GGACGTTCTG
ATTCACCTCA AGGCGCAGGA CCAGACACTG AGCTTCCGAA GATCATGCCG GGAGGGCGTG
TGCGGTTCAG ACGCGATGAA CATCAACGGC AAGAATGGCC TTGCCTGCAC GACCAACCTC
AACGCGCTGC CGCGCCATAT CGTTCTACGC CCGCTTCCGG GCCTGCCCGT CATACGCGAC
CTGATCGTGG ACATGACGGA TTTCTTCAAG CAATACCAAT CGATCAAGCC GTACCTGATC
AACGACACTG CACCGCCGGA GCGTGAGCGC CTTCAATCAC CTCAGGAACG CGACCAATTG
GACGGCCTCT ATGAGTGCAT CCTGTGCGCC TGCTGCTCAA GCGCATGTCC GTCGTATTGG
TGGAATCCCG ACAAGTATGT CGGCCCGGCC GGGCTGCTGC AGGCGTATCG CTTTCTCGTG
GATTCGCGCG ACGAAGCCAC TGCCGCGCGC CTGGACAACC TCGACGATCC CTACCGCCTG
TTCCGCTGCC GAACGATCAT GAACTGTACG AACGTGTGCC CCAAGGGCCT GAACCCAGCC
AAGGCGATCA GCGAGATCCG AAACATGCTC GCCCGCAGGG CAATTTGA
 
Protein sequence
MSDTRVFEVY RYDPDSDVQP YMQAFNVELK PDDRMLLDVL IHLKAQDQTL SFRRSCREGV 
CGSDAMNING KNGLACTTNL NALPRHIVLR PLPGLPVIRD LIVDMTDFFK QYQSIKPYLI
NDTAPPERER LQSPQERDQL DGLYECILCA CCSSACPSYW WNPDKYVGPA GLLQAYRFLV
DSRDEATAAR LDNLDDPYRL FRCRTIMNCT NVCPKGLNPA KAISEIRNML ARRAI