Gene Rpic_2496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2496 
Symbol 
ID6286294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2609354 
End bp2610427 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content63% 
IMG OID642626072 
Product40-residue YVTN family beta-propeller repeat protein 
Protein accessionYP_001900060 
Protein GI187929573 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.431237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.565249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAC TGACCCACTA CTTCCGGATC GCCACGTTGC TTTGCGTGGG TTGGGTATCG 
ACCCTCCAGG CGGTTGCCGA GGTGCCGGAT CCCGTCGCCT ACGTCACGAA TCAGGGCGGC
GGTGTGACCG TGCTCAATGC ACGCACGCTC AAACAGCTTG ACGAGATTGC CGTGGGCAAG
GACCCGCGCG GCCTTGCCGT TACCCCCGAT GGCCGCTGGT TGCTGACGGC CAACCAGGGC
AGCGCCGATG TGTCGGTGAT TGACACAGGC ACACGCAAGG AGATCAAGCG CATCGCAGTC
GGCAGGAATG TCGAGTTCAT GCGCATCTCG CCCGACGGCC GCCGGGCGTT CGTCACCTAC
GAGCCTTCGT CGGAAGGCGG GCCGCCGGGC AAGAACGACC GGGCCGTGAA AGACGAGAAG
GATGAGAACG ATGAAGCCCC CGCCGAAGTC GCGATCATCG ACCTCAGCCA GTGGGCCGTG
GTCGGCCGCA TCAAGGCCGC CCGCGAGACC GAAGCCATCG AATTTTCACC GGACGGAAAG
TTGCTGCTGG TGGCCAACGA AGGTGACAAC ACGGTCGGCG TTTATGAGCT GTCGACGCTC
AAGCAGATCC GGCGGGTGGA TGTCGCGCCA TACGGCAATC GGCCGCGCGG CATCAAGATC
GCGCCGGATG GAAAGACCTA TGTGGTGACG CTGGAAAACT CGAACAACCT GTTGCTGCTG
GATGCCGGTT TCAAGCCGAT CAAGACCGTG CCCACTGGGC AGGGACCATA CGGGATCGCG
TTTGACCGCG AGGGCCAGTA CCTCTGGGTG GCTGCCAGCC GCGCTGATCA GTTGCAGGTG
TTCGATGCCC GCACCTTTGC GCAAGTGGCC GCCATTCCGG TCGGCAAGCG TTGCTGGCAT
TTCAGCTTCA CGCCGGGTGA TCGGAAGCTG CTGCTTGCCT GCGGCCGCTC GAACACTGTG
CAGGTGATCG ACCCGCAGAA GCGCGAGGTC GTCGATACGC TCCAAGGCTA CAAGTTGCCC
TGGGGTGTGG TGACGTATCC AACCTCGGTG GGCAGCCTCG ATGCGCCGCG CTGA
 
Protein sequence
MKALTHYFRI ATLLCVGWVS TLQAVAEVPD PVAYVTNQGG GVTVLNARTL KQLDEIAVGK 
DPRGLAVTPD GRWLLTANQG SADVSVIDTG TRKEIKRIAV GRNVEFMRIS PDGRRAFVTY
EPSSEGGPPG KNDRAVKDEK DENDEAPAEV AIIDLSQWAV VGRIKAARET EAIEFSPDGK
LLLVANEGDN TVGVYELSTL KQIRRVDVAP YGNRPRGIKI APDGKTYVVT LENSNNLLLL
DAGFKPIKTV PTGQGPYGIA FDREGQYLWV AASRADQLQV FDARTFAQVA AIPVGKRCWH
FSFTPGDRKL LLACGRSNTV QVIDPQKREV VDTLQGYKLP WGVVTYPTSV GSLDAPR