| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2441 |
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| Symbol | valS |
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| ID | 6287660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2549971 |
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| End bp | 2552847 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642626019 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001900007 |
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| Protein GI | 187929520 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.602088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC AGAACCAGTC CCTCGCCAAG AGTTTCGAAC CCGCCACCAT CGAGCAGAAG
TGGAGCGCGG CCTGGGAAGC AATGGGCGTC TCCCGCGCGA CGCTCGAGGC CGGCAAGCCC
GACTTTTGTA TCCAGCTCCC GCCGCCGAAC GTGACGGGCA CGCTGCACAT GGGCCACGCG
TTCAACCAGA CCATCATGGA CGGCCTGACG CGCCACGCGC GCATGGCCGG TGCCAACACA
CTTTGGGTGC CGGGCACCGA CCACGCCGGC ATCGCCACCC AGATCGTCGT CGAGCGCCAA
CTGGATGCCC AGGGTGTATC GCGCCACGAC ATGGGCCGCG AGAAGTTCGT CGAGAAAGTG
TGGGAATGGA AGGAGCAATC GGGCTCGACC ATCACGCGCC AGGTGCGCCG GATGGGCGCC
TCGATCGACT GGGAGCGAGA ATACTTCACG ATGGACCCGA AGATGTCGCG CGCGGTCAGC
GACGTGTTCG TGCGTCTCTA CGAGCAAGGC CTGATCTACC GCGGCAAGCG CCTGGTCAAC
TGGGACCCGG TGCTGGGCAC CGCAGTGTCC GACCTGGAAG TGGTGAGCGA GGAAGAGGAA
GGCTCGCTGT GGCACATCCG CTATCCGCTG GCCGAACCGG ATACCGTGCA TGGCCTGACG
CACCTGACGG TCGCCACCAC CCGTCCGGAA ACGATGCTCG GCGACACGGC CGTGATGGTG
CATCCTGAGG ACGAACGTTA CGCCCACCTC ATCGGCAAGT TCGTCCACCT GCCGCTGACT
GATCGCAAGA TCCCGGTGAT TGCCGACGAA TACGTCGACC GCGCGTTCGG TACCGGCGTG
GTCAAGGTGA CCCCGGGCCA CGACTTCAAC GACTACGCGG TCGGCCAGCG CCACAAGCTG
CCGCAGTTGT CGATCCTGAC GCTCGACGCG AAGATCGTTG CCGATGCTCC CGCCGCCTAT
GCCGGCCTGG ATCGCTTCGA CGCGCGTAAA AAGATCGTCG AGGACCTCGA AGCGCAAGGC
CTGCTGGCCG AAGTCAAGAA ACACACGCTG ATGGTGCCGC GCGGTGACCG GACCGGTGTC
GTGATCGAGC CGATGCTGAC CGACCAGTGG TTCGTCGCCA TGAGCAAGCC GGCACCGGAA
GGCACGCGCT TCCCGGGCCG CTCCATCGCT GAAGTGGCGC TGGACGCCGT GCAGAGCGGC
AAGATCAAGC TCGTTCCCGA GCAGTGGGTC AACACGTACA ACCAGTGGCT GAACAACATC
CAGGACTGGT GTATCTCGCG CCAACTGTGG TGGGGCCACC AGATTCCGGC GTGGTACGAC
GAAGCCGGCA ACGTGTACGT GGGGCGCACG GAAGAAGAAG CCCGCGCCCA GGCCGCAGCC
AAGGGTTACA CCGGCGCCCT CAAGCGTGAC GACGACGTGC TCGACACGTG GTTCTCGTCC
GCGCTGGTGC CGTTCTCGTC GCTGGGCTGG CCGGCCGACA CGCCAGAGCT GAAGCACTTC
CTGCCTTCCA CCGTGCTGGT GACGGGCTAC GACATCATCT TCTTCTGGGT GGCGCGCATG
GTCATGATGA CCCTGCATTT CACCGGCGAA GTGCCCTTCC ACACCGTCTA TGTGCATGGC
CTCGTGCGCG ATTCGGAAGG CAAGAAGATG AGCAAGTCCG AGGGCAACAC GCTCGACCCG
GTGGACCTGA TCGACGGTAT CGCGCTGGAG CCGCTGCTGG CCAAGCGCAC CACCGGCCTG
CGCCGCCCAA AGGATGCGCC CAAGGTCGAA AAGCGCACGC GCAAGGAATT TCCCGACGGC
ATTCCCGCAT TCGGCGCCGA CGCGTTGCGC TTCACCTTCG CGTCGCTCGC CACGCTGGGC
CGCAGCATCA ACTTTGACCC GGGCCGCTGC GAGGGTTACC GCAACTTCTG CAACAAGCTG
TGGAACGCCA CGCGCTTCGT ACTGATGAAC ACCGAAGGCC AGGACTGCGG CATGCAGGAA
TGCGTCGGTG ATTGCGGCCC CGAAGGCTAC CTGGACTTCT CGCAGGCCGA CCGTTGGATC
GTCTCGCTGC TGCAGCGCGT GGAAACCGAA GTGGAGAAAG GCTTTGCCGA CTACCGCTTC
GACAACATCG CCAACGCCAT CTACAAATTC GTCTGGGACG AATACTGCGA CTGGTACCTG
GAACTGGCGA AAGTGCAGAT CCAGACCGGC ACGCCGGCCC AGCAACGCGC GACGCGCCGT
ACCCTGCTGC GCGTGCTGGA AACCGTGCTG CGCCTGGCGC ATCCGATCAT TCCGTTCATT
ACCGAAGAAC TCTGGCAGAA GGTTGCGCCG ATGGCCGGCC GCGCCAAGGG CGATGGCACC
GAAAGCCTCG CGCTGCAGGA ATACCCGCGC GCCGTCCTGA CCAAGATCGA CGAGCAGGCC
GAGCAGTGGG TGCAGCAGCT AAAGGCACTG GTAGACGCCT GCCGCAACCT TCGCGGCGAG
ATGAACATCT CCCCTGCGCA ACGTGTGCCG CTGTACGCCA ATGGCGAAGC CGAGTTCCTG
CAGGTGGCGG CGCCGTACGT GCAAGCGCTG GGCAAGCTGT CCGAAGTGAA GGTCTACACG
GACGCTGCCG CCATGGAGCA GGACGGCGCC GGTGCGCCGG TCGCCATCGT CGGCGAGAAC
AAGCTGCTGC TGAAGATCGA GATCGACGTG GCTGCCGAGC ATGCGCGCCT GTCGAAGGAA
ATCGACCGCT TGCGCGGCGA GATCACCAAG TGCGAAGCCA AGCTCGGTAA CGAATCGTTC
GTCGCCCGCG CGCCGGCCGC CGTGGTGGAA CAGGAACAAA AGCGTGTGGC CGATTTCAAA
GCCACGCTGG CCAAGCTGGA AGCCCAGATC GCACGGCTGC CGGTACAGGC AGCCTGA
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| Protein sequence | MTDQNQSLAK SFEPATIEQK WSAAWEAMGV SRATLEAGKP DFCIQLPPPN VTGTLHMGHA
FNQTIMDGLT RHARMAGANT LWVPGTDHAG IATQIVVERQ LDAQGVSRHD MGREKFVEKV
WEWKEQSGST ITRQVRRMGA SIDWEREYFT MDPKMSRAVS DVFVRLYEQG LIYRGKRLVN
WDPVLGTAVS DLEVVSEEEE GSLWHIRYPL AEPDTVHGLT HLTVATTRPE TMLGDTAVMV
HPEDERYAHL IGKFVHLPLT DRKIPVIADE YVDRAFGTGV VKVTPGHDFN DYAVGQRHKL
PQLSILTLDA KIVADAPAAY AGLDRFDARK KIVEDLEAQG LLAEVKKHTL MVPRGDRTGV
VIEPMLTDQW FVAMSKPAPE GTRFPGRSIA EVALDAVQSG KIKLVPEQWV NTYNQWLNNI
QDWCISRQLW WGHQIPAWYD EAGNVYVGRT EEEARAQAAA KGYTGALKRD DDVLDTWFSS
ALVPFSSLGW PADTPELKHF LPSTVLVTGY DIIFFWVARM VMMTLHFTGE VPFHTVYVHG
LVRDSEGKKM SKSEGNTLDP VDLIDGIALE PLLAKRTTGL RRPKDAPKVE KRTRKEFPDG
IPAFGADALR FTFASLATLG RSINFDPGRC EGYRNFCNKL WNATRFVLMN TEGQDCGMQE
CVGDCGPEGY LDFSQADRWI VSLLQRVETE VEKGFADYRF DNIANAIYKF VWDEYCDWYL
ELAKVQIQTG TPAQQRATRR TLLRVLETVL RLAHPIIPFI TEELWQKVAP MAGRAKGDGT
ESLALQEYPR AVLTKIDEQA EQWVQQLKAL VDACRNLRGE MNISPAQRVP LYANGEAEFL
QVAAPYVQAL GKLSEVKVYT DAAAMEQDGA GAPVAIVGEN KLLLKIEIDV AAEHARLSKE
IDRLRGEITK CEAKLGNESF VARAPAAVVE QEQKRVADFK ATLAKLEAQI ARLPVQAA
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