Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2409 |
Symbol | |
ID | 6287413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 2505935 |
End bp | 2507416 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642625986 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_001899975 |
Protein GI | 187929488 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.92601 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAG CGTCAGAAGC GCCGGCCAAT GAATCGGTGA CATTCGACAG CTTCGGCCTG CATCCGGACG TCCTCCGCGC GCTGACCGAA AGCGGTTACA CCAAGCCCAC GCCCATCCAG GCCGCAGCCA TTCCGGTGGT GACCGCCGGC CACGACGTCA TGGGCGCCGC GCAAACCGGC ACCGGCAAGA CTGCCGGTTT CTCGCTGCCG ATCATCCATA ACCTGCTGCC CGACGCCAAC ACGAGCGCGT CGCCGGCGCG CCACCCGGTG CGGGCGCTGA TCCTCACGCC CACACGCGAA CTGGCCGACC AGGTGTACGA CAACGTTGCC AAGTACGCGA AGTACACGGC GTTGCGCAGC GCTGTCGTGT TCGGGGGCGT CGACATGAAC CCGCAGACCG AGCAATTGCG CCGCGGCGTC GAAATCCTGG TTGCCACGCC GGGCCGCCTG CTCGACCACG TGCAGCAGCG CAGCGTGAAC CTGTCGCAGG TGCGCATGCT GGTGCTGGAC GAAGCCGATC GCATGCTCGA CATGGGCTTT CTGCCCGACC TGCAGCGCAT CATCAACCTG CTGCCGGCAC ACCGCCAGAC GCTGCTGTTC TCGGCCACGT TCTCTCCCGA GATCAAGAGG CTGGCCGCGA GCTACCTGCG TCATCCGCAA ACTATTGAAG TGGCACGCAG CAACGCCACG GCAGAGAACG TCCGTCAGGT CATCTACACC GTGCCGGACA ACCACAAGCA GGCCGCGCTC GTGCACCTGC TGCGCCAGCG CGCGGAGCAA GGCCTGCCGC GCCAGTGCAT CGTGTTCTCC AACAGCAAGA TCGGCTGCTC GCGCCTGGCG CGCGCGCTGG AGCGCGAAGG CATCAACGCC AACGCCATCC ACGGCGACAA GACGCAGACC GAGCGCATGC AAACGCTCGA GGCGTTCAAG CAGGGTACCG TTGATGTACT AGTCGCCACC GACGTTGCCG CGCGCGGTCT CGATATCTCG CAGATGCCGT GCGTGATCAA CTTCGACCTG CCGTTCAACG CAGAAGACTA CGTGCACCGG ATTGGCCGCA CGGGCCGTGC CGGTGCTTCC GGTGATGCAC TGTCGCTGTT CGCCCCGGGC GATGAACGCC TGCTGGCCGA CATCGAAAAG CTGATCAAGC GCAACCTGCC GCGCGAGCAG CTGGCTGATT TCGATCCGAC CGGCGAACAG GCGCGTGACC GTGAGCGCCG CGAGCGCGAC GAAAAGCGTG CCCGCAGCGA AGTCCGCCGC TCCCGCGAGC GGGAAGACCG CAACGGTACC CGCGTGCTCG ATCACACGAT CGTGCGCCCG GCGTTCCGCC CTTCCGACGA CCCGTTCTTC AATCGCCCGT ACGAATCGTC CGTGCCAGCG GAATCGGCGG AGGCTGCCAA GCCAGCGCAA GCAGCCGGTC ACCCGCGCAC CGCCAAGCGC CCGATCGCGG CGCTGCTCGG TGGCGTGCCG CGCAAGCGTT AA
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Protein sequence | MSEASEAPAN ESVTFDSFGL HPDVLRALTE SGYTKPTPIQ AAAIPVVTAG HDVMGAAQTG TGKTAGFSLP IIHNLLPDAN TSASPARHPV RALILTPTRE LADQVYDNVA KYAKYTALRS AVVFGGVDMN PQTEQLRRGV EILVATPGRL LDHVQQRSVN LSQVRMLVLD EADRMLDMGF LPDLQRIINL LPAHRQTLLF SATFSPEIKR LAASYLRHPQ TIEVARSNAT AENVRQVIYT VPDNHKQAAL VHLLRQRAEQ GLPRQCIVFS NSKIGCSRLA RALEREGINA NAIHGDKTQT ERMQTLEAFK QGTVDVLVAT DVAARGLDIS QMPCVINFDL PFNAEDYVHR IGRTGRAGAS GDALSLFAPG DERLLADIEK LIKRNLPREQ LADFDPTGEQ ARDRERRERD EKRARSEVRR SREREDRNGT RVLDHTIVRP AFRPSDDPFF NRPYESSVPA ESAEAAKPAQ AAGHPRTAKR PIAALLGGVP RKR
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