Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_2177 |
Symbol | |
ID | 6289860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 2289274 |
End bp | 2290533 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642625748 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_001899743 |
Protein GI | 187929256 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.556942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0164112 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCG ATTACACGCC CAAGGTCAAG GACATGCAGG CACGCCTGCT CGCATTCTTC GACCAGCACA TCTACCCGAA TGAGCACCGC TTCCACGAAG AAATCGAGGC CAACCGCCGC GCCGGCAATG CGTGGATCCC GACCAAGGTG ATCGAAGAAC TCAAGCCGCT GGCACGCAAG GCCGGGCTGT GGAACCTGTT CCTGCCGCGT TCGCCGCGCG CGCCCGAAGG GCTGTCGAAC CTCGAATACG CGCCGCTGTG CGAGATCATG GGCCGCGTGC CCTGGGCGCC GGAAGTGTTC AACTGTTCCG CGCCCGACAC CGGCAACATG GAGACGCTTG AGCGCTATGC GTCGGAAGAA CTGAAAGACC GCTGGCTGGA GCCGCTGCTG CGCGGTGAGA TCCGCTCGGC CTTCCTGATG ACCGAACCGG CCGTGGCTTC GTCGGACGCC ACCAACATCG AATGCCGCAT CGAACGCCAG GGCGACGAAT ACGTCATCAA CGGCCGCAAG TGGTGGTCGT CGGGCGCCGG CGACCCGCGC TGCGCCGTCT ACATCGTCAT GGGCAAGACC AACCCGGATG CCGGCCGCCA CGAGCAGCAA TCGATGATCG TGGTGCCAGC CAATGCGCCG GGCATCACGG TCATGCGCCC GCTGTCGGTG TTCGGTTACG ACGATGCGCC GCACGGCCAC ATGGAAGTCG ACCTGAAAGA CGTGCGCGTG CCGGTGGGCA ACATCCTCCT GGGTGAAGGC CGCGGTTTCG AGATCGCTCA AGGCCGCCTG GGCCCGGGCC GCATCCACCA CTGCATGCGC AGCATCGGCG TGGCCGAGCG TGCGCTGGAG CTGATGTGCA AGCGCCTGTC GTCGCGCATC GCATTCGGCA AGGCCATTGC GCAGCACAGC GTCTGGCACG AACGCATTGC CGAAGCGCGC TGCATGATCG AGCAGGCCCG CCTGCTGACG CTCAAGGCCG CGTACATGAT GGACACCGTC GGCAACAAGG TCGCCAAGGC CGAGATCGCG ATGATCAAGG TCGTGGCACC GAACATCGCC TGCCAGATCG TCGACTGGGC GATCCAGGCA CACGGCGGCG GCGGCGTGTC GGGTGATTTC CCGCTGGCTT CGGCCTACGC CCACCAGCGC ACGCTGCGTC TGGCCGACGG CCCGGATGAA GTGCACCGCG CGGCCATCGC CAAGCTGGAA CTGGCCAAGC ATCTGCACCT GAAAGACGTT GTCGACATGC CGGTCACACG CGGCGCCTGA
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Protein sequence | MNFDYTPKVK DMQARLLAFF DQHIYPNEHR FHEEIEANRR AGNAWIPTKV IEELKPLARK AGLWNLFLPR SPRAPEGLSN LEYAPLCEIM GRVPWAPEVF NCSAPDTGNM ETLERYASEE LKDRWLEPLL RGEIRSAFLM TEPAVASSDA TNIECRIERQ GDEYVINGRK WWSSGAGDPR CAVYIVMGKT NPDAGRHEQQ SMIVVPANAP GITVMRPLSV FGYDDAPHGH MEVDLKDVRV PVGNILLGEG RGFEIAQGRL GPGRIHHCMR SIGVAERALE LMCKRLSSRI AFGKAIAQHS VWHERIAEAR CMIEQARLLT LKAAYMMDTV GNKVAKAEIA MIKVVAPNIA CQIVDWAIQA HGGGGVSGDF PLASAYAHQR TLRLADGPDE VHRAAIAKLE LAKHLHLKDV VDMPVTRGA
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