Gene Rpic_2171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2171 
Symbol 
ID6286816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2284204 
End bp2285292 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content64% 
IMG OID642625742 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001899737 
Protein GI187929250 
COG category[R] General function prediction only 
COG ID[COG3173] Predicted aminoglycoside phosphotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0620475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0229307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAA CGGACCAGCA GGATTTTTCC GCCTTCGAGG GCACGCGCCC CGTGGCAGAA 
CAGCAGAAGT TCGACATTGG CGCGCTGGAA GCGTGGATGC GCGAACACGT GGCCGGCTTT
GCCGGCCCGC TCACGGTTGA ACAGTTCAAG GGCGGCCAGT CGAACCCGAC GTTCAAGCTG
ATCACGCCGT CGCGCACGTA CGTGATGCGC GCGAAGCCTG GCCCCAAGGC GAAGTTGCTG
CCGTCGGCAC ACGCCATCGA GCGCGAATAT CGGGTGATGG ATGCGCTCGC CAAGACCGAC
GTCCCCGTCG CGAAGATGTA TGCGCTGTGC GAAGACGAAG CCGTGATCGG CCGCGCCTTC
TACATCATGG AGTTCGTACA GGGCCGCGTG CTGTGGGATC AGGCCCTACC CGGCATGGCG
CCCGCCGAGC GCACCGCGAT CTATGACGAG ATGAACCGCG TCATTTCTGC GCTGCACACG
GTGGACTACG CCGCCATCGG CCTGGCCGAC TACGGCAAAC CCGGCAACTA TTTCGCGCGC
CAGATCGAGC GCTGGAGCAA GCAGTACAAG CTGTCGGAAA CCGAGTCGAT TCCGGCCATG
GACAACCTGA TCGAATGGCT GCCCAAGCAC GTGCCGCAGG AAGCCGAGGA AATCACCAGC
ATCGTTCACG GCGACTACCG GCTCGACAAC CTGATCTTCC ACCCGACCGA GCCGCGTGTG
CTGGCCATCC TCGATTGGGA ACTCTCGACG CTGGGCCACC CGCTGGCCGA TTTCAGCTAC
CACTGCATGA GCTGGCACAT CGAGCCGGGT CAGTTCCGCG GCGTGGCAGG TCTGGACTTC
GCCGCCCTCG GCATCCCCAC AGAAGCCGAG TACATCCGCC AATACGAAGA ACGCACCGGC
CGCCGCATCA CAGGCGACTG GAACTTCTAC CTCGCCTACA ACATGTTCCG CATTGCCGGC
ATCCTGCAGG GGATCATGAA GCGCGTGGTG GATGGCACGG CGTCGTCGGC GCAGGCGATG
GAAGCGGGCA AGCGCGCCCG CCCGATGGCC GAACTGGGCT GGAAGTACGC CCAGCAGGCC
GGCGCCTGA
 
Protein sequence
MAQTDQQDFS AFEGTRPVAE QQKFDIGALE AWMREHVAGF AGPLTVEQFK GGQSNPTFKL 
ITPSRTYVMR AKPGPKAKLL PSAHAIEREY RVMDALAKTD VPVAKMYALC EDEAVIGRAF
YIMEFVQGRV LWDQALPGMA PAERTAIYDE MNRVISALHT VDYAAIGLAD YGKPGNYFAR
QIERWSKQYK LSETESIPAM DNLIEWLPKH VPQEAEEITS IVHGDYRLDN LIFHPTEPRV
LAILDWELST LGHPLADFSY HCMSWHIEPG QFRGVAGLDF AALGIPTEAE YIRQYEERTG
RRITGDWNFY LAYNMFRIAG ILQGIMKRVV DGTASSAQAM EAGKRARPMA ELGWKYAQQA
GA