Gene Rpic_2160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2160 
Symbol 
ID6289758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2272627 
End bp2273838 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID642625731 
Producthypothetical protein 
Protein accessionYP_001899726 
Protein GI187929239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.183215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAT TCCGCTCCAA GGCTCCCCAA CGTCTTTCCC CCGATGCAGA ACGGCTGGTA 
GCCGATGCGC TGGCGCTGGA CGCGTCAGGC AGCCGCATCG AAGACGTCTA TTGGGAACAA
AGGCTGTCCG AACGTCTTTC CCGGCTGCTC AAGAACGGCA GCCAGACCGC GCTCGACGCC
GCGCTCGACC ATCTTTTCAA GCACAACGAG GAGGCCTCCG ACGTGCTCGC CGAACAGGCC
GAGACACTCG CCGAATCGGC CATCCTCAGT TCGGGTGGCG TCGAATATGA CGCGTTGCTG
ATCGCAGCGC CCATCCTGGC ACACACGCGC TACATGATCC CGTCGGGCAC GATCAAGCCC
GAGATGGCGC AGACGCTGCA GGTACACCTG CAGGCCCATG TGATGGCCTC CAACGCTCGC
GTAGCGCTGG CCCCTTACCT GTACAGCATC GATCAGCTGC CGCGCACGCA TTCCGACACC
TTTGCGCTCA CGCACAAGCT GGCCGCCTAT GCACTCTCTG GCCAACCCGC CAAGGTCGAA
TTGCGCGACA TGCCCGAGAC GGCGCCGATC CTGGCCGACC CGCGCTACCT GGTGGCAATC
GTCGTGGCGC AGCACGGCCA AGCGCTGTTC CGCTGGCAGG AAGACGCCAA GGAGCACCAC
GCAGAGCGGT CCGCCTGCCT GGAGCAATGG CGCGAGCAGG TCACGCCGAC CATCTCCATG
CTGATGCCCG GCTGCGAGTT CGACCTGCTT TTGCCGGACG CCTTCTTCCT GTCCTGCCGC
GAGTCCGACA AGCAGATCCG CCCGCTGACC GTGCGTGCTG CCGTCAATTA CCTGCAGGGC
GCGCTCGATA TGCCGGCCAA CCGCTTTGGC GCCATCATCG GCGCCTTCGG TGAAGAACAG
ATCGAGGAAT ACCGCGTGGC CTTCACGGTG CGCGGTGAGA AAGACCTCAT CTACGGCATC
GTCTGGCCTG TCTATGGCCG CGACGGTGGC GCCACGGATG TCGCCGCAGA AGGTGAACCG
GGCAGCCCGC TGGAGCAGAT CTGCGATGAG TTGCGCGCCT GCGGCATCGA AGACATCTTC
CGCCACGGCC AGCTCTTCGA ACCGGAGTAC TGCGAAGACT GCGGCGCGCC GCTCTATGCG
GATCGCTCGG CCGAGATCGT CCACGCAGAA ATGCCGGAAG ACGCGCCGAC ACAGCAACCG
CTGTTCCATT GA
 
Protein sequence
MAGFRSKAPQ RLSPDAERLV ADALALDASG SRIEDVYWEQ RLSERLSRLL KNGSQTALDA 
ALDHLFKHNE EASDVLAEQA ETLAESAILS SGGVEYDALL IAAPILAHTR YMIPSGTIKP
EMAQTLQVHL QAHVMASNAR VALAPYLYSI DQLPRTHSDT FALTHKLAAY ALSGQPAKVE
LRDMPETAPI LADPRYLVAI VVAQHGQALF RWQEDAKEHH AERSACLEQW REQVTPTISM
LMPGCEFDLL LPDAFFLSCR ESDKQIRPLT VRAAVNYLQG ALDMPANRFG AIIGAFGEEQ
IEEYRVAFTV RGEKDLIYGI VWPVYGRDGG ATDVAAEGEP GSPLEQICDE LRACGIEDIF
RHGQLFEPEY CEDCGAPLYA DRSAEIVHAE MPEDAPTQQP LFH