| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2155 |
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| Symbol | prpB |
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| ID | 6286696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2267107 |
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| End bp | 2268003 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642625726 |
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| Product | 2-methylisocitrate lyase |
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| Protein accession | YP_001899721 |
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| Protein GI | 187929234 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2513] PEP phosphonomutase and related enzymes |
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| TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0722195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGGCAA ATACCCATGC CAGTGCAGGC GCCCGCTTCC GCCAGGCGCT GGTCGATGAG
TCGCCGCTGC AGGTGGTCGG CACCATCAAC GCCAACCACG CGCTGCTGGC CAAGCGCGCC
GGCTATCGCG CGATCTACCT GTCGGGCGGC GGCGTGGCAG CTGGTTCGCT GGGCTTGCCG
GACCTCGGCA TATCGGGCCT GGACGACGTT TTGACCGACG TCCGCCGCAT CACCGATGTA
TGCGACGTAC CGCTGCTGGT AGATGTCGAC ACGGGCTTCG GCGCTTCCGC CTTCAACGTG
GCACGCACGA CCAAGTCACT CATCAAGTTT GGCGCAGCGG CCATGCACAT TGAAGACCAG
GTCGGCGCCA AGCGCTGCGG CCATCGCCCC AACAAGGAGA TCGTTTCTAA GGACGAAATG
GTCGATCGCA TCAAGGCTGC CTTAGATGCC CGCACCGACG CGAGCTTTGT CGTCATGGCC
CGCACCGATG CGCTGGCCGT CGAAGGGTTC GACCGCGCCC TGGAACGCGC CGTGGCCTGC
GTGGAAGCTG GTGCGGACGC GATCTTTCCC GAGGCGATGA CGGAACTGTC GATGTACCGG
AAGTTTGTCG ACGCGGTAAA GGTGCCGGTG CTAGCCAACA TCACCGAATT TGGGCAGACG
CCGCTTTTCA CGCGCGATGA GCTGGCATCC GCAGGTGTGT CGATGATCCT GTATCCGCTA
TCGGCATTCC GCGCGATGAA CAAGGCAGCG GAGAACGTCT ACACCGCCAT TCGTCGCGAT
GGCACGCAAC AGAACGTCGT CGACACCATG CAGACGCGCA TGGAACTCTA CGACAGCATC
GGTTACCACG ACTACGAAGC CAAGCTGGAC GCGCTGTTCG CACAGAACCG CGGATGA
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| Protein sequence | MMANTHASAG ARFRQALVDE SPLQVVGTIN ANHALLAKRA GYRAIYLSGG GVAAGSLGLP
DLGISGLDDV LTDVRRITDV CDVPLLVDVD TGFGASAFNV ARTTKSLIKF GAAAMHIEDQ
VGAKRCGHRP NKEIVSKDEM VDRIKAALDA RTDASFVVMA RTDALAVEGF DRALERAVAC
VEAGADAIFP EAMTELSMYR KFVDAVKVPV LANITEFGQT PLFTRDELAS AGVSMILYPL
SAFRAMNKAA ENVYTAIRRD GTQQNVVDTM QTRMELYDSI GYHDYEAKLD ALFAQNRG
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