| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2143 |
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| Symbol | |
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| ID | 6288078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2255083 |
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| End bp | 2256153 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625714 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001899709 |
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| Protein GI | 187929222 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.444097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGA TTGCAGTGTT GCCGGGTGAC GGCATTGGTA AGGAAATCGT CGCCGAGGCC
GTGAAGGTGC TCAAGGTGCT GGGCGAGTCG TTCGAGATGG AATTCGCCCC GGTGGGCGGC
GCGGGCTACG AGGCCAAGGG CCATCCGCTG CCGGAAGACA CGCTCAAGCT CGCCAAGGAA
GCTGACGCGA TCCTGTTTGG CGCCGTGGGC GACTGGAAGT ACGACACGCT GGCGCGCGAA
CTGCGCCCGG AGCAGGCCAT TCTGGGCCTG CGCAAGCACC TGCAGCTGTT CGCCAATTTC
CGTCCGGCGA TCTGCTATCC CGAGTTGACC GGCGCATCGA GCCTCAAGCC GGAAATCGTT
GCCGGTCTGG ATATCCTGAT CGTGCGTGAG TTGAATGGCG ACATTTACTT CGGCCAACCG
CGCGGCGTGC GCGCGGCGCC CGACGGGCTG TTCGCCGGCG CGCGCGAAGG TTTCGACACC
ATGCGCTACG CCGAGCCGGA AATCCGCCGC ATCGCGCACG TCGCCTTCCA GGCCGCCGCC
AAGCGCGGCA AGAAGCTCTG CAGCGTCGAC AAGGCCAACG TGCTCGAGAC GTTCCAGTTC
TGGAAGGACA TCGTCACCGA CGTGCACAAG GAATATCCGG AAGTCGAGTT GTCGCACATG
TACGTGGACA ACGCGGCCAT GCAGCTCGTG AAGGCGCCGA AGAACTTCGA CGTGATCGTC
ACCGGCAACA TGTTCGGCGA CATCCTCTCG GACGAGGCCG CCATGCTGAC GGGCTCGATC
GGCATGCTGC CGTCGGCGTC GCTCGATGCG AATAACAAGG GCCTGTATGA GCCGTCGCAC
GGCTCCGCGC CGGACATCGC GGGCAAGGGC GTTGCCAACC CGCTGGCGAC GATCCTGTCG
GCGGCGATGA TGCTGCGCTA TTCGCTGAAC AAGGCCGAGC AGGCTGATCG CATCGAAACG
GCTGTCAAGA AGGTACTGGC GCAGGGCTAC CGGACCGGCG ACATCCTGAC GCCGGGCTGC
AAACAGGTGG GCACTGTGGA GATGGGCGAC GCGGTGGTCG CTGTCTTGTA A
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| Protein sequence | MTKIAVLPGD GIGKEIVAEA VKVLKVLGES FEMEFAPVGG AGYEAKGHPL PEDTLKLAKE
ADAILFGAVG DWKYDTLARE LRPEQAILGL RKHLQLFANF RPAICYPELT GASSLKPEIV
AGLDILIVRE LNGDIYFGQP RGVRAAPDGL FAGAREGFDT MRYAEPEIRR IAHVAFQAAA
KRGKKLCSVD KANVLETFQF WKDIVTDVHK EYPEVELSHM YVDNAAMQLV KAPKNFDVIV
TGNMFGDILS DEAAMLTGSI GMLPSASLDA NNKGLYEPSH GSAPDIAGKG VANPLATILS
AAMMLRYSLN KAEQADRIET AVKKVLAQGY RTGDILTPGC KQVGTVEMGD AVVAVL
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