| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2116 |
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| Symbol | |
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| ID | 6286761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 2232073 |
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| End bp | 2232729 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642625687 |
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| Product | TonB family protein |
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| Protein accession | YP_001899682 |
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| Protein GI | 187929195 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.223061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTCACC CTCGTACTCT CAAGATTCTC GTGGTCGTGC TGTTGATGCA CGCGGGCGTG
CTGATGCTGA TTCACCTTGG CCTGATCGCA CCGCGCCCGA CTGTCGAAGA ACCGCTGGAA
ATCCAGGCGC ACATCATTCC GGCCGCGCCT CAGCCGATCA GGCAGCCGGA GCCGCCCAAG
CAGCAGCCGG TCAAGCAAGA GGCGCCCAAG CCTGTCAACA TCGTCAGGCC GGTCGCGCAA
CCCAAGCCCA CGCCGATGCC GACGCCCACG CTCCCGCCAT CGGACAACGC CCCCGTGGTG
CCCGCCGCAC CGCCCGCGCC GCCGGCACCG GCCCCTGAAC AAGCGCCCGC GCCGGCCCCC
GTTTCGTCCG GTCCGATCAG CGTCGGCATC AACGACATCC AGTGCAGCGA GCCGCCGCTC
GTCTATCCCA GCATGTCGCA GAAAATGGGC GAGGAAGGCC GCGCCATGGT CAAGATTTCC
ATCGGCACGG CCGGTGAGGT CACCAATGTT GCGGTCACGT CGTCGTCCGG CTCGCCTCGC
CTGGACCGCG CCGCCACCGA TGCCGCGCGT GCCATCAAGT GCAGCCCCTA CAAGCAGAAC
GGCCGCGCCG TGCCCGTGGT GGCCAGCAAG CCGTTCGTCT TCAAGCTCGA TAACTAA
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| Protein sequence | MIHPRTLKIL VVVLLMHAGV LMLIHLGLIA PRPTVEEPLE IQAHIIPAAP QPIRQPEPPK
QQPVKQEAPK PVNIVRPVAQ PKPTPMPTPT LPPSDNAPVV PAAPPAPPAP APEQAPAPAP
VSSGPISVGI NDIQCSEPPL VYPSMSQKMG EEGRAMVKIS IGTAGEVTNV AVTSSSGSPR
LDRAATDAAR AIKCSPYKQN GRAVPVVASK PFVFKLDN
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