Gene Rpic_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_2078 
Symbol 
ID6289559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp2186631 
End bp2187533 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content60% 
IMG OID642625648 
ProductAspartyl/Asparaginyl beta-hydroxylase 
Protein accessionYP_001899644 
Protein GI187929157 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3555] Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCAAGT GGATTATCGT GGCCCTGTAT CTGGGTTCCA TTCTGTACGT GCACTTTCGC 
GGCAAGGTGC GCCTGAAATT CTGGCGCCAG ATGTTCGACC ACTCGGCCGT GGTCGCGCCG
GTCAACTGCT TCATGTACGC CTTTTCGGGC GTGCCGCAGA CGCCGTATGT GCCGGTCGAG
CGCTTTCCGG ATCTGGAAAA ACTGCAAGCC GCGTGGCCAC AGATTCGCGA CGAAGGCCTT
GCGCTCATCA ACCTGCGCAA GATCAAGGCC GCCGAGAAGA ACGACGACGC CGGCTTCAAC
TCGTTCTTCA AGAATGGCTG GAAGCGCTTC TACCTGAAAT GGTACGAGGC GCATCACCCC
TCAGCCGAAC AGCTTTGCCC GCAGACCGTC GCGCTGCTGC GCGATCTGCC CAGCGTGAAG
GCGGCGATGT TTGCCGAACT GCCGCCGGGC GGCAAGCTGA ATCCGCACCG TGATCCGTTT
GCCGGCTCGC TGCGCTATCA CCTGGGCCTG TCCACGCCCA ACGACGACCG ATGCTTCATC
GAAGTCGACG GCCAGCGCCA CAGCTGGCGT GACGGCCAGG GCGTGGTCTT TGACGAGACC
TATCTGCACT GGGCCGAAAA CGCCTCCGAC AAGGATCGTC TGATTCTTTT CTGCGATATC
GAACGCCCGA TGAAATTCGG CTGGGCGCAG CGCATCAACA AATGGCTCGG CCGCAAGGTC
ATGACTGCTG CCAGCTCGCC CAACGATGAG GGTGACCAGA CCGGCGGCAT CAACAAGCTG
TTCCGCTATG TGTGGGTGAT GGGCCAGTAC CGCCGCCGCT TCAAGGCGTG GAACCGCAAG
GTCTACTACG TGGTGAAGTT CGGCCTGATC ATTGGCGTGG CAGCGTTGAT CATCTGGATC
TGA
 
Protein sequence
MIKWIIVALY LGSILYVHFR GKVRLKFWRQ MFDHSAVVAP VNCFMYAFSG VPQTPYVPVE 
RFPDLEKLQA AWPQIRDEGL ALINLRKIKA AEKNDDAGFN SFFKNGWKRF YLKWYEAHHP
SAEQLCPQTV ALLRDLPSVK AAMFAELPPG GKLNPHRDPF AGSLRYHLGL STPNDDRCFI
EVDGQRHSWR DGQGVVFDET YLHWAENASD KDRLILFCDI ERPMKFGWAQ RINKWLGRKV
MTAASSPNDE GDQTGGINKL FRYVWVMGQY RRRFKAWNRK VYYVVKFGLI IGVAALIIWI