| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_2072 |
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| Symbol | |
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| ID | 6288136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 2181268 |
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| End bp | 2182491 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625641 |
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| Product | integrase family protein |
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| Protein accession | YP_001899638 |
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| Protein GI | 187929151 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.841134 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.685608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCA CAGACACGGC GGTCCGCAAC GCCCGGCCGG CCGAAAAGCC TATCAAGCTG
TTTGATGGCG GCGGCTTGTT TCTCCACATC ACGCCCGGCG GGCAGCGCTA CTGGCGGCTG
AAGTATCGGT TCGCGGGCAA AGAGAAGCTG CTGGCCCTTG GCGTGTACCC TGAAGTCGGC
CTGAAAGAGG CGAGGGACCG GCGCGAGGAA GCCAAACGGC TGCTGGGCGA GGGGGTTGAC
CCGTCAGTCG AACGCAAGGT GCGGAAGGTG GCGACGGTCG AGCGGGCGGC AAACAGTTTT
GAGGCTGTGG CCCGCGAGTG GCACACCAAG TACGCGCCCG GGTGGTCCAA GAGCAACGCC
GACAAGGTGA TCGCCCGCCT GCAGAACGAC GTATTCCCCT GGCTCGGCGG CCGGCCGATC
GCTGAGCTGA AGGCGCCCGA TCTGCTGGCC GTGTGTCGCC GCGTCGAGTC TCGTGGCGCT
CTGGATACTG CACACCGAGT GCTGCAGACC TGCGGCCAGA TCTTCCGCTA CGCTGTCGCC
ACTGGGCGGG CAGAGCGCGA TCCGTCGGGT GACCTGCGGG GCGCGTTGCC GCCGGCCAAG
GGGAAGCACT ACGCCGCGCC GACCGACCCC AAAGAGGTGG CCGGCTTGCT GCGTGTGTTT
GACGGCTTCA CCGGAACATT CGTTGTGAAG TGCGCGCTGC TGCTGGCCCC AATGCTCTTC
GTTCGACCAG GTGAACTGCG GGCCGCGGAA TGGGCAGACA TCGATCTGGA TGCAGGCGAA
TGGCGTTTCG TGTCATCCAA GCGGGACGTG GCTCACATCG TGCCGCTATC CACCCAGGCC
GTCGCAATCC TGCGTGATCT GCACGCGTTG ACCGGCCACG GGCACTACGT CTTCCCCGGT
GCCAGAGACA AGAAAAAACC CATGTCGGAA GCTGCCATTA ACGCGGCTCT CAAGCGCATG
GGTATCGATA CGCAGAAGGA GTTCACCGGC CACGGCGTGC GCCCCATTGC GCGCACCATC
CTGCGTGAGG TGCTGGGTTT CGAGGCCGAG GTAATCGAGC TGCAACTAGC GCACAGGAAG
AAAGACCCAA ACGGCGCGGC ATATGACCGT GTGGCCTTCC TGGCTGTGCG CAAGCAGATG
ATGCAGGCGT GGGCGGATTA CCTGGATCGC TTGAAGACTG GGGCAGCCGT AGTGCCAATG
CCTACGTCAC GGACGGCCGC GTGA
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| Protein sequence | MALTDTAVRN ARPAEKPIKL FDGGGLFLHI TPGGQRYWRL KYRFAGKEKL LALGVYPEVG
LKEARDRREE AKRLLGEGVD PSVERKVRKV ATVERAANSF EAVAREWHTK YAPGWSKSNA
DKVIARLQND VFPWLGGRPI AELKAPDLLA VCRRVESRGA LDTAHRVLQT CGQIFRYAVA
TGRAERDPSG DLRGALPPAK GKHYAAPTDP KEVAGLLRVF DGFTGTFVVK CALLLAPMLF
VRPGELRAAE WADIDLDAGE WRFVSSKRDV AHIVPLSTQA VAILRDLHAL TGHGHYVFPG
ARDKKKPMSE AAINAALKRM GIDTQKEFTG HGVRPIARTI LREVLGFEAE VIELQLAHRK
KDPNGAAYDR VAFLAVRKQM MQAWADYLDR LKTGAAVVPM PTSRTAA
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